Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq230146 91.5 1e-13 >seq230146 Length=915 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 20945 GTTTCCC-CCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGT 21003 || |||| || |||| | ||| |||| || | || || || ||||| ||||| |||| Sbjct 559 GTATCCCACCACGCAAGCGGAGGACCAAGTGTAGTGTTGATTCTTTTTGTATGTTGTAGT 618 Query 21004 CCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCA 21063 | | || || | |||| || ||||| ||||| ||| |||| | | ||||| || Sbjct 619 CAGATAGTGTACGTCCGTCTTCGAGCTGCTTGCCAGCAAAAATCAAACGTTGCTGATCTG 678 Query 21064 CGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCT 21123 || | || || ||||| || ||| |||||| | ||| ||||||| | | Sbjct 679 GTGGAATACCCTCTTTGTCCTGAATTTTTGCTTTCACATTTTCGATCGTATCACTGCCTT 738 Query 21124 CCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || ||| | ||||| ||||| ||||| | |||||| |||||||||||||| Sbjct 739 CCACTTCGAGAGTAATTGTCTTACCGGTGAGCGTTTTCACAAATATTTGCAT 790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419796507547208