Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09-
24] 478,538 sequences; 547,921,014 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq31829 161 1e-34
seq230146 98.7 1e-15
>seq31829
Length=2224
Score = 161 bits (178), Expect = 1e-34
Identities = 243/343 (71%), Gaps = 2/343 (1%)
Strand=Plus/Plus
Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635
||||| |||||| |||||| || | || || || | || || |||||||||| |||
Sbjct 1765 GAGCCACTGCTGATCGAGAATCCACATCGTTTTGTCTTGTTTCCAATACAATACCACGAC 1824
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
| |||| | ||||| || |||| || || |||||||| || || ||||| || ||
Sbjct 1825 GTATGGCAATTTTACAAGAAAGCCGTTGCCTCCTTCTGGACAGTAGAAGAGGTTGATCTT 1884
Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCT-TGAACGACAACGAGCGCCATTTCATCAAGCA 116754
|| |||||| | ||||| ||| | | || | |||||| ||||| ||| |
Sbjct 1885 TCAAAGGACTTGTCGCACTGG-AGCAGTCTTAAAGTGGGCGAGCGTCATTTTATCTCCTA 1943
Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTT 116814
||| |||| || ||||| || ||||| || ||||| |||||| || | || |||||
Sbjct 1944 CGTCTTGGCATTCTTCGCTGCAAGCGATGGGATCGTACTAGAGAATTTGCTTGAACGTTT 2003
Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874
| ||||||||| ||| | | ||| || ||||| ||||| | ||||| ||||| ||
Sbjct 2004 CAGTCAGGAGGTTCAGATACCGGAGATACGCTGCTTTTACGGTATGCAGATTGCCATCGA 2063
Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
||| | ||||| |||||||| || ||||||||||| |||
Sbjct 2064 AAACATTCACTCTGAAATGTACTCTCTTCTCATCGACACTTAC 2106
>seq230146
Length=915
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||||||||| || ||||||||||| || || || || || |||| || |||| ||
Sbjct 790 ATGCAAATATTTGTGAAAACGCTCACCGGTAAGACAATTACTCTCGAAGTGGAAGGCAGT 731
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | ||| | || | |||||||| ||||||||||| || || | || |||
Sbjct 730 GATACGATCGAAAATGTGAAAGCAAAAATTCAGGACAAAGAGGGTATTCCACCAGATCAG 671
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| | || | || ||||| ||||| || |||| || || || |||||||||
Sbjct 670 CAACGTTTGATTTTTGCTGGCAAGCAGCTCGAAGACGGACGTACACTATCTGACTACAAC 611
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|| || || || | || || || | || | |||||| | || ||
Sbjct 610 ATACAAAAAGAATCAACACTACACTTGGTCCTCCGCTTGCGTGGTGG 564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 512137300430880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |