Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq230146 93.3 3e-14 >seq230146 Length=915 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||||| || |||||| |||||||||||||| || || ||| |||| Sbjct 579 AGGACCAAGTGTAGTGTTGATTCTTTTTGTATGTTGTAGTCAGATAGTGTACGTCCGTCT 638 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| || ||||| | || ||||| || || | | ||| ||||| Sbjct 639 TCGAGCTGCTTGCCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCCTCTTTGTCC 698 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 || ||||||||| | || | |||| ||| | ||| || || | || || || Sbjct 699 TGAAT-TTTTGCTTTCACATTTTCGATCGTATCACTGCCTTCCACTTCGAGAGTAATTGT 757 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || |||||||| ||||||||||| || ||||| Sbjct 758 CTTACCGGTGAGCGTTTTCACAAATATTTGCAT 790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 321187785337280