Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09-
24] 478,538 sequences; 547,921,014 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq31829 118 9e-22
>seq31829
Length=2224
Score = 118 bits (130), Expect = 9e-22
Identities = 239/353 (68%), Gaps = 4/353 (1%)
Strand=Plus/Plus
Query 57509 TGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGA 57568
||| ||||| || |||||||| | | | |||||| ||||||| || |||| | ||
Sbjct 1764 TGAGCCACTGCTGATCGAGAATCCACATCGTTTTGTCTTGTTTCCAATACAATACCACGA 1823
Query 57569 CATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCT 57628
| | ||| | | ||||| || || | || || || ||||| || ||||| || || ||
Sbjct 1824 CGTATGGCAATTTTACAAGAAAGCCGTTGCCTCCTTCTGGACAGTAGAAGAGGTTGATCT 1883
Query 57629 GTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACA 57688
|| ||||| || | ||| || |||| ||| | ||||||| |
Sbjct 1884 TTCAAAGGACTTGTCGCACTGGAGCAGTCTTAAAGTGGGCGAGCGTCATTTTATCTCCTA 1943
Query 57689 CGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATT 57748
||| ||||| || ||||| ||| |||||| || || ||||||||| | ||| | |
Sbjct 1944 CGTCTTGGCATTCTTCGCTGCAAGCGATGGGATCGTACTAGAGAATTTGCTTGAACG--T 2001
Query 57749 TTCA--CAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806
|||| || || || || | ||||| | ||||||||||| | || | |||||
Sbjct 2002 TTCAGTCAGGAGGTTCAGATACCGGAGATACGCTGCTTTTACGGTATGCAGATTGCCATC 2061
Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA 57859
|||||| | || || |||||||| || || |||||||| || ||| | |||||
Sbjct 2062 GAAAACATTCACTCTGAAATGTACTCTCTTCTCATCGACACTTACATTAAGGA 2114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 443099947980960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |