Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq31829 93.3 4e-14 >seq31829 Length=2224 Score = 93.3 bits (102), Expect = 4e-14 Identities = 216/318 (68%), Gaps = 6/318 (2%) Strand=Plus/Minus Query 14141 AATGTATGTATCAATAAGTAAGCTA-TACATTTCAGAGTGTATGTTTTCCATAGCTATCT 14199 |||||| || || || || ||| | |||||||||||||| |||||||| || || |||| Sbjct 2109 AATGTAAGTGTCGATGAG-AAGAGAGTACATTTCAGAGTGAATGTTTTCGATGGCAATCT 2051 Query 14200 GAAAACCATAAAAGCATC-TAGCTTCCGACCATTGTACTTCC-GAGTAAAATCTTTCGGC 14257 | | ||| |||||||| | || | |||| || || ||| || | ||| | ||| Sbjct 2050 GCATACCGTAAAAGCAGCGTATC-TCCGGTATCTGAACCTCCTGACTGAAA-CGTTCAAG 1993 Query 14258 CAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAA 14317 |||||| || || || ||||| || || || || |||||||| | || ||||| Sbjct 1992 CAAATTCTCTAGTACGATCCCATCGCTTGCAGCGAAGAATGCCAAGACGTAGGAGATAAA 1933 Query 14318 GTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTC 14377 | |||| | || || | |||| | || || ||||| |||||||| || || Sbjct 1932 ATGACGCTCGCCCACTTTAAGACTGCTCCAGTGCGACAAGTCCTTTGAAAGATCAACCTC 1873 Query 14378 ATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATAA 14437 || |||||||| || || || ||||| || || | | ||||| || | ||| Sbjct 1872 TTCTACTGTCCAGAAGGAGGCAACGGCTTTCTTGTAAAATTGCCATACGTCGTGGTATTG 1813 Query 14438 TATAGGAAAAACTACAAA 14455 ||| ||||| | ||||| Sbjct 1812 TATTGGAAACAAGACAAA 1795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476858399029200