Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09-
24] 478,538 sequences; 547,921,014 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq31829 82.4 7e-11
>seq31829
Length=2224
Score = 82.4 bits (90), Expect = 7e-11
Identities = 215/319 (67%), Gaps = 8/319 (3%)
Strand=Plus/Minus
Query 13929 AATGTATGTATCAATAAGTAAGCTA-TACATTTCAGAGTGTATGTTTTCTATAGCTATCT 13987
|||||| || || || || ||| | |||||||||||||| |||||||| || || ||||
Sbjct 2109 AATGTAAGTGTCGATGAG-AAGAGAGTACATTTCAGAGTGAATGTTTTCGATGGCAATCT 2051
Query 13988 GAAAACCATAAAAACATC-TAGCTTCTG-ACCATTGTACCTCC-GAGTAAAATCTTTCTG 14044
| | ||| ||||| || | || || | | | | || |||||| || | ||| | |||
Sbjct 2050 GCATACCGTAAAAGCAGCGTATCTCCGGTATC--TGAACCTCCTGACTGAAA-CGTTCAA 1994
Query 14045 CCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14104
||| || || || || ||||| || || || || |||||||| | || ||||
Sbjct 1993 GCAAATTCTCTAGTACGATCCCATCGCTTGCAGCGAAGAATGCCAAGACGTAGGAGATAA 1934
Query 14105 AGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTT 14164
| | |||| | || || | |||| | | || ||||| |||||||| || |
Sbjct 1933 AATGACGCTCGCCCACTTTAAGACTGCTCCAGTGCGACAAGTCCTTTGAAAGATCAACCT 1874
Query 14165 CATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14224
| || |||||||| || || || ||||| || || | | ||||| || | |||
Sbjct 1873 CTTCTACTGTCCAGAAGGAGGCAACGGCTTTCTTGTAAAATTGCCATACGTCGTGGTATT 1814
Query 14225 ATATAGGAAAAACTACAAA 14243
||| ||||| | |||||
Sbjct 1813 GTATTGGAAACAAGACAAA 1795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475726013410320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |