Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq31829 82.4 7e-11 >seq31829 Length=2224 Score = 82.4 bits (90), Expect = 7e-11 Identities = 215/319 (67%), Gaps = 8/319 (3%) Strand=Plus/Minus Query 13929 AATGTATGTATCAATAAGTAAGCTA-TACATTTCAGAGTGTATGTTTTCTATAGCTATCT 13987 |||||| || || || || ||| | |||||||||||||| |||||||| || || |||| Sbjct 2109 AATGTAAGTGTCGATGAG-AAGAGAGTACATTTCAGAGTGAATGTTTTCGATGGCAATCT 2051 Query 13988 GAAAACCATAAAAACATC-TAGCTTCTG-ACCATTGTACCTCC-GAGTAAAATCTTTCTG 14044 | | ||| ||||| || | || || | | | | || |||||| || | ||| | ||| Sbjct 2050 GCATACCGTAAAAGCAGCGTATCTCCGGTATC--TGAACCTCCTGACTGAAA-CGTTCAA 1994 Query 14045 CCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14104 ||| || || || || ||||| || || || || |||||||| | || |||| Sbjct 1993 GCAAATTCTCTAGTACGATCCCATCGCTTGCAGCGAAGAATGCCAAGACGTAGGAGATAA 1934 Query 14105 AGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTT 14164 | | |||| | || || | |||| | | || ||||| |||||||| || | Sbjct 1933 AATGACGCTCGCCCACTTTAAGACTGCTCCAGTGCGACAAGTCCTTTGAAAGATCAACCT 1874 Query 14165 CATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14224 | || |||||||| || || || ||||| || || | | ||||| || | ||| Sbjct 1873 CTTCTACTGTCCAGAAGGAGGCAACGGCTTTCTTGTAAAATTGCCATACGTCGTGGTATT 1814 Query 14225 ATATAGGAAAAACTACAAA 14243 ||| ||||| | ||||| Sbjct 1813 GTATTGGAAACAAGACAAA 1795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475726013410320