Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09-
24] 478,538 sequences; 547,921,014 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq230146 132 5e-26
>seq230146
Length=915
Score = 132 bits (146), Expect = 5e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || || || | || || || | ||| |||||||||||||||||||| ||
Sbjct 564 CCACCACGCAAGCGGAGGACCAAGTGTAGTGTTGATTCTTTTTGTATGTTGTAGTCAGAT 623
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| ||| | ||||||||| || || |||||| | |||| |||||||||||| || ||
Sbjct 624 AGTGTACGTCCGTCTTCGAGCTGCTTGCCAGCAAAAATCAAACGTTGCTGATCTGGTGGA 683
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| || |||||||| ||||||| ||| | | ||| | ||| || || ||| |||
Sbjct 684 ATACCCTCTTTGTCCTGAATTTTTGCTTTCACATTTTCGATCGTATCACTGCCTTCCACT 743
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | ||||| ||||| | ||||| || ||||||||||||
Sbjct 744 TCGAGAGTAATTGTCTTACCGGTGAGCGTTTTCACAAATATTTGCATA 791
Score = 86.0 bits (94), Expect = 6e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| ||||| | ||||||||| | ||||| ||||||||||||||||| |||||||| |
Sbjct 792 CCACCTCGCAGACGCAAAACCAGATGAAGGGTAGATTCTTTTTGTATATTGTAATCCGAC 851
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| |||| | || ||||| || || || ||| | || || || || || ||||||||
Sbjct 852 AGGGTGCGCCCATCCTCGAGCTGCTTGCCCGCAAAAATGAGGCGCTGTTGGTCGGGAGGA 911
Query 143078 AT 143079
||
Sbjct 912 AT 913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 503981579288160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |