Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq31829 91.5 2e-13 >seq31829 Length=2224 Score = 91.5 bits (100), Expect = 2e-13 Identities = 216/324 (67%), Gaps = 13/324 (4%) Strand=Plus/Plus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 ||||||| || || || ||| | ||| || | ||||| || || |||||||| | Sbjct 1802 TGTTTCCAATACAATACCACGACGTATGGCAATTTTACAAGAAAGCCGTTGCCTCCTTCT 1861 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||| || |||||||| ||||| || |||||| ||| | ||| | || | Sbjct 1862 GGACAGTAGAAGAGGTTGATCTTTCAAAGGACTTGTCGCACTGGAGCAGTCTT------- 1914 Query 125116 AAACTGAGCGAGAGT----TTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGA 125171 ||| || ||||| || |||| || || | ||||| ||||| || | |||||| Sbjct 1915 AAAGTGGGCGAGCGTCATTTTATCTCCTACGTCTTGGCATTCTTCGCTGCAAGCGATGGG 1974 Query 125172 ATCGTCAACGACAATCTG-TTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTC 125230 ||||| || ||| || |||| ||| ||| ||| ||| | || || ||| | Sbjct 1975 ATCGTACTAGAGAATTTGCTTGA-ACGTTTCAGTCAGGAGGTTCAGATACCGGAGATACG 2033 Query 125231 GTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACT 125290 ||||||||||| | || || || || ||| | ||||| |||||||||||| || Sbjct 2034 CTGCTTTTACGGTATGCAGATTGCCATCGAAAACATTCACTCTGAAATGTACTCTCTTCT 2093 Query 125291 GATTGACATGTACATTCGCGATCC 125314 || |||| |||||| ||||| Sbjct 2094 CATCGACACTTACATTAAGGATCC 2117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 736626387656880