Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09-
24] 478,538 sequences; 547,921,014 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq31829 91.5 2e-13
>seq31829
Length=2224
Score = 91.5 bits (100), Expect = 2e-13
Identities = 216/324 (67%), Gaps = 13/324 (4%)
Strand=Plus/Plus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
||||||| || || || ||| | ||| || | ||||| || || |||||||| |
Sbjct 1802 TGTTTCCAATACAATACCACGACGTATGGCAATTTTACAAGAAAGCCGTTGCCTCCTTCT 1861
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115
|||| || |||||||| ||||| || |||||| ||| | ||| | || |
Sbjct 1862 GGACAGTAGAAGAGGTTGATCTTTCAAAGGACTTGTCGCACTGGAGCAGTCTT------- 1914
Query 125116 AAACTGAGCGAGAGT----TTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGA 125171
||| || ||||| || |||| || || | ||||| ||||| || | ||||||
Sbjct 1915 AAAGTGGGCGAGCGTCATTTTATCTCCTACGTCTTGGCATTCTTCGCTGCAAGCGATGGG 1974
Query 125172 ATCGTCAACGACAATCTG-TTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTC 125230
||||| || ||| || |||| ||| ||| ||| ||| | || || ||| |
Sbjct 1975 ATCGTACTAGAGAATTTGCTTGA-ACGTTTCAGTCAGGAGGTTCAGATACCGGAGATACG 2033
Query 125231 GTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACT 125290
||||||||||| | || || || || ||| | ||||| |||||||||||| ||
Sbjct 2034 CTGCTTTTACGGTATGCAGATTGCCATCGAAAACATTCACTCTGAAATGTACTCTCTTCT 2093
Query 125291 GATTGACATGTACATTCGCGATCC 125314
|| |||| |||||| |||||
Sbjct 2094 CATCGACACTTACATTAAGGATCC 2117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 736626387656880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |