Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq230146 129 4e-25 >seq230146 Length=915 Score = 129 bits (142), Expect = 4e-25 Identities = 171/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 15131 TGTCTGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAA 15190 ||| | ||||| | ||| | | || || || || || || ||||||||||||||||| Sbjct 558 TGTATCCCACCACGCAAGCGGAGGACCAAGTGTAGTGTTGATTCTTTTTGTATGTTGTAG 617 Query 15191 TCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCG 15250 || ||| | | ||||||| | || |||||||| | ||||||||||| || || Sbjct 618 TCAGATAGTGTACGTCCGTCTTCGAGCTGCTTGCCAGCAAAAATCAAACGTTGCTGATCT 677 Query 15251 TTTGGAATTCCTTCTTTGT-CACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATT 15309 |||||| || ||||||| | || ||||||| || ||| |||| || ||||| || Sbjct 678 GGTGGAATACCCTCTTTGTCCTGAATTTTTGCT-TTCACATTTTCGATCGTATCACTGCC 736 Query 15310 TTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| || || | ||||| || ||||| || || ||||| ||||| ||||||||| Sbjct 737 TTCCACTTCGAGAGTAATTGTCTTACCGGTGAGCGTTTTCACAAATATTTGCATA 791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360066905034258