Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq230146 96.9 2e-15 >seq230146 Length=915 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 ||||| ||||| || |||||||| || || || || || | ||| | || || Sbjct 582 ACCAAGTGTAGTGTTGATTCTTTTTGTATGTTGTAGTCAGATAGTGTACGTCCGTCTTCG 641 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 | || || || ||||| ||||| |||||||| || | || | ||| ||||| || | Sbjct 642 AGCTGCTTGCCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCCTCTTTGTCCTGA 701 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATC--TGCCGGCTCCACATCGACCGTAATTGTTT 44090 |||||| ||| || | | | ||||| |||| ||||| |||| |||||||| | Sbjct 702 ATTTTTGCTTTCACATTTTCGATCGTATCACTGCCT--TCCACTTCGAGAGTAATTGTCT 759 Query 44091 TACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||||||| | || ||||||||||||||||| Sbjct 760 TACCGGTGAGCGTTTTCACAAATATTTGCAT 790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 352708472511624