Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq230146 87.8 1e-12 >seq230146 Length=915 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAG--AATCTT 20057 ||||| |||||||| |||||||||||||||||||| | | ||||| | | |||| Sbjct 582 ACCAAGTGTAGTGTTGATTCTTTTTGTATGTTGTAGT--CAGATAGTGTACGTCCGTCTT 639 Query 20058 CCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGG 20117 | | || ||||| ||| |||| | | || ||||| || | || |||||||| Sbjct 640 CGAGCTGCTTGCCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCCTCTTTGTCCT 699 Query 20118 CAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTT 20177 ||||||| |||||| | | | | ||| | |||| ||| | ||||| || | Sbjct 700 GAATTTTTGCTTTCACATTTTCGATCGTATCACTGCCTTCCACTTCGAGAGTAATTGTCT 759 Query 20178 TGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 | ||||| | |||||| ||||| |||||||| Sbjct 760 TACCGGTGAGCGTTTTCACAAATATTTGCAT 790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417140091137178