Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq230146 96.9 3e-15 >seq230146 Length=915 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || | ||| || | |||||||| | || ||||| ||||| | ||| || || Sbjct 564 CCACCACGCAAGCGGAGGACCAAGTGTAGTGTTGATTCTTTTTGTATGTTGTAGTCAG-- 621 Query 94841 ATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 ||||||| | || || ||||| || || |||| || || | |||||||||||| | Sbjct 622 ATAGTGTACGTCCGTCTTCGAGCTGCTTGCCAGCAAAAATCAAACGTTGCTGATCTGGTG 681 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 ||||||| |||||||| | ||||||||| || || ||| || ||| | || | Sbjct 682 GAATACCCTCTTTGTCCTGAATTTTTGCTTTCACATTTTCGATCGTATCACTGCCTTCCA 741 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || || || || || || || ||||||||||| || ||||| Sbjct 742 CTTCGAGAGTAATTGTCTTACCGGTGAGCGTTTTCACAAATATTTGCAT 790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445609645321680