Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09-
24] 478,538 sequences; 547,921,014 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq18524 100 7e-16
seq26384 87.8 5e-12
>seq18524
Length=2666
Score = 100 bits (110), Expect = 7e-16
Identities = 117/158 (74%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| || ||| |||| || ||| ||| || |||| ||| || || ||||| |
Sbjct 576 TTCACTCATGCCTCGCCCACTCTGTTCAACAGCGGTACTCCTAAACCCCAAATGTCAAGT 635
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||||||||| | ||| |||| ||| ||| || ||||| | ||| ||||| ||| |
Sbjct 636 TGCTTTCTTCTCACAATTAAGGGTGATAGCATTGAAGGTATATATGATACACTGAAGGAC 695
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT 363704
|| ||| | || || || ||||||||||| ||||||||
Sbjct 696 TGCGCTATCATATCAAAAAATGCAGGCGGTATTGGTGT 733
>seq26384
Length=2369
Score = 87.8 bits (96), Expect = 5e-12
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 364129 GCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGC 364188
|||||||| || | || || ||||| ||||| || | ||||||||||| ||| |||||
Sbjct 1120 GCCATCATCGAAGCTCAAATCGAGACTGGAACCCCTTTCATGTTGTACAAGGATGCGTGC 1179
Query 364189 AACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAG 364248
|| |||||||| ||||| |||||| | || || |||| ||||| || || || ||
Sbjct 1180 AATCGCAAGTCAAACCATCAGCACTTGGGCACTATTCGTTGCAGCAATCTTTGCACTGAA 1239
Query 364249 ATTATTGAATA 364259
|| |||| ||
Sbjct 1240 ATAGTTGAGTA 1250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1295362389616716
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |