Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09-
24] 478,538 sequences; 547,921,014 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq31829 125 8e-24
>seq31829
Length=2224
Score = 125 bits (138), Expect = 8e-24
Identities = 240/350 (69%), Gaps = 3/350 (1%)
Strand=Plus/Minus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
||||| || ||||| | ||||| ||||||||||| || | || || || ||||| ||
Sbjct 2108 ATGTAAGTGTCGATGAGAAGAGAGTACATTTCAGAGTGAATGTTTTCGATGGCAATCTGC 2049
Query 93422 AATCCGTAGAAACATC-TAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAG 93480
| ||||| || || | || || | || ||||| || || ||| || | || | |
Sbjct 2048 ATACCGTAAAAGCAGCGTATCTCCGGT-ATCTGAACCTCCTGACTGAAACGTTCAAGCAA 1990
Query 93481 ATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATG 93540
||| || || || |||||| ||| || || || ||||| | | ||||||||
Sbjct 1989 ATTCTCTAGTACGATCCCATCGCTTGCAGCGAAGAATGCCAAGACGTAGGAGATAAAATG 1930
Query 93541 TTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTC 93600
||| | ||||||| | ||| | || | || ||||||||||| || |||||
Sbjct 1929 ACGCTCGCCCACTTTAAGACTGCTCCAGTGCGACAAGTCCTTTGAAAGATCAACCTCTTC 1870
Query 93601 GACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAAT 93660
|| ||||| || || || | ||||| ||||| | | ||||| ||| || ||||| ||
Sbjct 1869 TACTGTCCAGAAGGAGGCAACGGCTTTCTTGTAAAATTGCCATACGTCGTGGTATTGTAT 1810
Query 93661 TGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCTAGTT 93710
|||||| | ||||||||||| || || || | || | ||||| ||||
Sbjct 1809 TGGAAACAAGACAAAACGATGTGGATTCTCGATCAGCAGTGGCTC-AGTT 1761
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 553529811831120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |