Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq230146 152 4e-32 >seq230146 Length=915 Score = 152 bits (168), Expect = 4e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| ||||| | |||||||| || | ||||| ||||||||| || Sbjct 790 ATGCAAATATTTGTGAAAACGCTCACCGGTAAGACAATTACTCTCGAAGTGGAAGGCAGT 731 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||||||| ||||| |||||||||||||| ||||| Sbjct 730 GATACGATCGAAAATGTGAAAGCAAAAATTCAGGACAAAGAGGGTATTCCACCAGATCAG 671 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| ||||| ||| | || || || || | || || |||||| Sbjct 670 CAACGTTTGATTTTTGCTGGCAAGCAGCTCGAAGACGGACGTACACTATCTGACTACAAC 611 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||||||||| || |||| || || | || ||||| || || Sbjct 610 ATACAAAAAGAATCAACACTACACTTGGTCCTCCGCTTGCGTGGTGG 564 Score = 104 bits (114), Expect = 2e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 22322 GTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCA 22381 ||||||| ||||| ||||| || || || ||||| ||||| ||| | |||||| |||| Sbjct 915 GTATTCCTCCCGACCAACAGCGCCTCATTTTTGCGGGCAAGCAGCTCGAGGATGGGCGCA 856 Query 22382 CCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCG 22441 || | || |||||||| || ||||||||||| ||| | ||| | |||||||| |||| | Sbjct 855 CCCTGTCGGATTACAATATACAAAAAGAATCTACCCTTCATCTGGTTTTGCGTCTGCGAG 796 Query 22442 GAGGT 22446 | ||| Sbjct 795 GTGGT 791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417280069965970