Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq230146 129 6e-25 >seq230146 Length=915 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||||||||| |||||||| || | | || || ||||||| ||||||||||| Sbjct 594 GTTGATTCTTTTTGTATGTTGTAGTCAGATAGTGTACGTCCGTCTTCGAGCTGCTTGCCA 653 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| | || ||||| || || ||||| || ||||| || || | |||||||||| Sbjct 654 GCAAAAATCAAACGTTGCTGATCTGGTGGAATACCCTCTTTGTCCTG-AATTTTTGCTTT 712 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 ||| || | ||||||| | | |||||||| | ||| | ||||| ||||| | || Sbjct 713 CACATTTTCGATCGTATCACTGCCTTCCACTTCGAGAGTAATTGTCTTACCGGTGAGCGT 772 Query 64426 TTTTACGAAAATTTGCAT 64443 ||| || || |||||||| Sbjct 773 TTTCACAAATATTTGCAT 790 Score = 107 bits (118), Expect = 2e-18 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||||| || ||||||||||| || |||||||| | | ||||||| | || || Sbjct 810 ACCAGATGAAGGGTAGATTCTTTTTGTATATTGTAATCCGACAGGGTGCGCCCATCCTCG 869 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAAT 64338 ||||||||||| ||| ||||||| ||||| |||||||||||||| Sbjct 870 AGCTGCTTGCCCGCAAAAATGAGGCGCTGTTGGTCGGGAGGAAT 913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496656062208720