Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq230146 120 2e-22 >seq230146 Length=915 Score = 120 bits (132), Expect = 2e-22 Identities = 167/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 14944 TGTCTGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAA 15003 ||| | ||||| ||||| | | || || || || || || ||||||||||||||||| Sbjct 558 TGTATCCCACCACGCAAGCGGAGGACCAAGTGTAGTGTTGATTCTTTTTGTATGTTGTAG 617 Query 15004 TCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCG 15063 || || | | ||||||| | || |||||||| | |||||||| || || || Sbjct 618 TCAGATAGTGTACGTCCGTCTTCGAGCTGCTTGCCAGCAAAAATCAAACGTTGCTGATCT 677 Query 15064 TTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTT 15123 |||||| || || ||||| |||||| ||| ||| |||| || ||||| || | Sbjct 678 GGTGGAATACCCTCTTTGTCCTGAATTTTTGCTTTCACATTTTCGATCGTATCACTGCCT 737 Query 15124 TCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || | ||||| || ||||| || || ||||| ||||| ||||||||| Sbjct 738 TCCACTTCGAGAGTAATTGTCTTACCGGTGAGCGTTTTCACAAATATTTGCATA 791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355307624855330