Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09-
24] 478,538 sequences; 547,921,014 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq230146 96.9 4e-15
>seq230146
Length=915
Score = 96.9 bits (106), Expect = 4e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
|| ||||| || |||||||| ||||| || || |||| |||||||||||||| || ||
Sbjct 600 TCTTTTTGTATGTTGTAGTCAGATAGTGTACGTCCGTCTTCGAGCTGCTTGCCAGCAAAA 659
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTC-TTGAGCGT 46521
||||| || ||||| || | || | | ||| |||||| ||| || | | || | |
Sbjct 660 ATCAAACGTTGCTGATCTGGTGGAATACCCTCTTTGTCC-TGAATTTTTGCTTTCACATT 718
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | ||| || || |||||| || | || || || || || || |||||||| ||
Sbjct 719 TTCGATCGTATCACTGCCTTCCACTTCGAGAGTAATTGTCTTACCGGTGAGCGTTTTCAC 778
Query 46582 AAAGATTTGCAT 46593
||| ||||||||
Sbjct 779 AAATATTTGCAT 790
Score = 91.5 bits (100), Expect = 2e-13
Identities = 89/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| |||| | |||||| |||||||| | ||| || ||||| |||||||| || ||
Sbjct 792 CCACCTCGCAGACGCAAAACCAGATGAAGGGTAGATTCTTTTTGTATATTGTAATCCGAC 851
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGG 46481
|| |||||| | || |||||||||||||| || || || | |||||| |||||||
Sbjct 852 AGGGTGCGCCCATCCTCGAGCTGCTTGCCCGCAAAAATGAGGCGCTGTTGGTCGG 906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561857299331760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |