Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq230146 120 7e-22 >seq230146 Length=915 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || || |||||||| || ||||| || | || || | || ||||||||||| Sbjct 587 GTGTAGTGTTGATTCTTTTTGTATGTTGTAGTCAGATAGTGTACGTCCGTCTTCGAGCTG 646 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || || || | ||||| || ||||| ||||| || |||||||| |||||||| Sbjct 647 CTTGCCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCCTCTTTGTCCTGAATTTT 706 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | || || || || || || || | ||||||||| || |||| ||||| || || Sbjct 707 TGCTTTCACATTTTCGATCGTATCACTGCCTTCCACTTCGAGAGTAATTGTCTTACCGGT 766 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | |||||| Sbjct 767 GAGCGTTTTCACAAATATTTGCAT 790 Score = 100 bits (110), Expect = 6e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 |||||| || ||||| || || |||||||| ||||||||||| | || || | |||||| Sbjct 806 CAAAACCAGATGAAGGGTAGATTCTTTTTGTATATTGTAATCCGACAGGGTGCGCCCATC 865 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 ||||||||||| || || || || || || |||||||| |||||||| Sbjct 866 CTCGAGCTGCTTGCCCGCAAAAATGAGGCGCTGTTGGTCGGGAGGAAT 913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102679070830646