Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09-
24] 478,538 sequences; 547,921,014 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq230146 105 5e-17
seq220043 87.8 1e-11
>seq230146
Length=915
Score = 105 bits (116), Expect = 5e-17
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 563260 CGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAA 563319
||||| || | || || || |||||| || ||||| |||| ||| || | |
Sbjct 576 CGGAGGACCAAGTGTAGTGTTGATTCTTTTTGTATGTTGTAGTCAGATAGTGTACGTCCG 635
Query 563320 TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTA 563379
||||| || || || || |||||||| | | ||||||||| || ||||| || |||||
Sbjct 636 TCTTCGAGCTGCTTGCCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCCTCTTTG 695
Query 563380 TCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAAC 563438
|| ||||||||| ||| || || || |||||| || | || |||||||||||
Sbjct 696 TCCTGAATTTTTGCTTTCACATTTTCGATCGTATCACTGCCT-TCCACTTCGAGAGTAAT 754
Query 563439 AGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|| ||||| || || ||||| || || |||||||||
Sbjct 755 TGTCTTACCGGTGAGCGTTTTCACAAATATTTGCATA 791
>seq220043
Length=940
Score = 87.8 bits (96), Expect = 1e-11
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566
|| ||||| || || || | || || || ||||||||||| ||||||||||||||||||
Sbjct 878 GGAATTCCACCAGCACCCAGAGGTGTGCCACAAATTGAAGTCACTTTCGATATCGATGCC 819
Query 552567 AATGGAATTTTGAATGTGACTGC 552589
||||||||| | |||||| ||||
Sbjct 818 AATGGAATTCTCAATGTGTCTGC 796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4003988752353620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |