Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq230146 125 6e-24 >seq230146 Length=915 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || |||||||||||||| ||||| || | | || | | || || Sbjct 582 ACCAAGTGTAGTGTTGATTCTTTTTGTATGTTGTAGTCAGATAGTGTACGTCCGTCTTCG 641 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| |||||||| || ||||| || ||||| || ||||| || ||| Sbjct 642 AGCTGCTTGCCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCCTCTTTGTCCTGA 701 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 |||||| ||| ||| |||| | || ||| ||||||||| ||||| | || || Sbjct 702 ATTTTTGCTTTCACATTTTCGATCGTATCACTGCCTTCCACTTCGAGAGTAATTGTCTTA 761 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | ||||| |||||||| ||||| Sbjct 762 CCGGTGAGCGTTTTCACAAATATTTGCAT 790 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||| | ||| ||||| | ||||||||||||||||||||||||||||||||| | Sbjct 792 CCACCTCGCAGACGCAAAACCAGATGAAGGGTAGATTCTTTTTGTATATTGTAATCCGAC 851 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || | ||||| || ||||| || | |||||||| ||||| ||| Sbjct 852 AGGGTGCGCCCATCCTCGAGCTGCTTGCCCGCAAAAATGAGGCGCTGTTGGTCGGGAGGA 911 Query 101363 AT 101364 || Sbjct 912 AT 913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 393967232298066