Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09-
24] 478,538 sequences; 547,921,014 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq230146 107 1e-17
seq23899 98.7 6e-15
>seq230146
Length=915
Score = 107 bits (118), Expect = 1e-17
Identities = 115/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677
||||| || ||||| ||||||||||| | |||||| ||||| || ||||| || || |||
Sbjct 636 TCTTCGAGCTGCTTGCCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCCTCTTTG 695
Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737
|| ||||| ||| ||| ||| ||| || |||||| || | ||| || |||||
Sbjct 696 TCCTGAATTTTTGCTTTCACATTTTCGATCGTATCACTGCCTTCCACTTCGAGAGTAATT 755
Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| ||||||||||| || || || || |||||
Sbjct 756 GTCTTACCGGTGAGCGTTTTCACAAATATTTG 787
>seq23899
Length=2450
Score = 98.7 bits (108), Expect = 6e-15
Identities = 114/154 (74%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 474646 TAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC 474705
|||| |||| | || ||| |||||||| | ||||| |||| ||||||||| ||| ||
Sbjct 1146 TAAATTATTTGCTCCAGAAGAAATTTCTGCCATGGTGTTAGGAAAAATGAAAGAAAGTGC 1087
Query 474706 GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAA 474765
| | || ||||| | || || ||||||| | || |||||||||||||| ||
Sbjct 1086 GGAGGCCTACCTTGGGAAGCCTGTCACACATGCAGTGGTCACCGTTCCAGCATATTTCAA 1027
Query 474766 TGATTCTCAACGTCAAGCAACTAAAGATGCGGGA 474799
||| |||| || ||||| || ||||||||||||
Sbjct 1026 CGATGCTCAGCGGCAAGCTACAAAAGATGCGGGA 993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3247652383313624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |