Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq230146 84.2 4e-11 >seq230146 Length=915 Score = 84.2 bits (92), Expect = 4e-11 Identities = 130/184 (71%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || || || |||| | ||| |||| || | || || ||||||||||| || | Sbjct 609 ATGTTGTAGTCAGATAGTGTACGTCCGTCTTCGAGCTGCTTGCCAGCAAAAATCAAACGT 668 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || ||||| || || ||||| || || ||||| ||| ||||| || ||| Sbjct 669 TGCTGATCTGGTGGAATACCCTCTTTGTCCTGAATTTTTGCTTTCACATTTTCGATCGTA 728 Query 172008 T--CTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCT 172065 | ||| | ||| ||||| |||||||| || ||||| || | ||||| | ||||| | Sbjct 729 TCACTGCC--TTCCACTTCGAGAGTAATTGTCTTACCGGTGAGCGTTTTCACAAATATTT 786 Query 172066 GCAT 172069 |||| Sbjct 787 GCAT 790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899721725360400