Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09-
24] 478,538 sequences; 547,921,014 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq230146 84.2 4e-11
>seq230146
Length=915
Score = 84.2 bits (92), Expect = 4e-11
Identities = 130/184 (71%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
|| || || || |||| | ||| |||| || | || || ||||||||||| || |
Sbjct 609 ATGTTGTAGTCAGATAGTGTACGTCCGTCTTCGAGCTGCTTGCCAGCAAAAATCAAACGT 668
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| || || ||||| || || ||||| || || ||||| ||| ||||| || |||
Sbjct 669 TGCTGATCTGGTGGAATACCCTCTTTGTCCTGAATTTTTGCTTTCACATTTTCGATCGTA 728
Query 172008 T--CTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCT 172065
| ||| | ||| ||||| |||||||| || ||||| || | ||||| | ||||| |
Sbjct 729 TCACTGCC--TTCCACTTCGAGAGTAATTGTCTTACCGGTGAGCGTTTTCACAAATATTT 786
Query 172066 GCAT 172069
||||
Sbjct 787 GCAT 790
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899721725360400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |