Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq31829 120 4e-21 >seq31829 Length=2224 Score = 120 bits (132), Expect = 4e-21 Identities = 241/355 (68%), Gaps = 2/355 (1%) Strand=Plus/Plus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 ||||| |||||| ||| || || | || |||||| |||| || || | ||||| Sbjct 1765 GAGCCACTGCTGATCGAGAATCCACATCGTTTTGTCTTGTTTCCAATACAATACCACGAC 1824 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 ||||| || | ||| | |||| ||| |||||||| ||||| | || ||||| || || Sbjct 1825 GTATGGCAATTTTACAAGAAAG-CCGTTGCCTCCTTCTGGACAGTAGAAGAGGTTGATCT 1883 Query 1455836 CGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCA 1455895 ||| | |||||| || | | | |||||| ||||| ||| | Sbjct 1884 TTCAAAGGACTTGTCGCACTGGAGCAGTCTTAAAGTGGGCGAGCGTCATTTTATCTCCTA 1943 Query 1455896 CGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCT 1455955 |||| | || || || ||| || |||||||| ||||| ||||| || | || | Sbjct 1944 CGTCTTGGCATTCTT-CGCTGCAAGCGATGGGATCGTACTAGAGAATTTGCTTGAACGTT 2002 Query 1455956 TTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCG 1456015 | | | ||||| || | || ||| ||| | |||||||| | ||||| ||||||| Sbjct 2003 TCAGTCAGGAGGTTCAGATACCGGAGATACGCTGCTTTTACGGTATGCAGATTGCCATCG 2062 Query 1456016 AAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 ||||||| |||||||||| ||||| || || |||||||| ||| | ||||| || Sbjct 2063 AAAACATTCACTCTGAAATGTACTCTCTTCTCATCGACACTTACATTAAGGATCC 2117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7131655330347156