Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq230146 134 1e-26 seq26384 89.7 5e-13 >seq230146 Length=915 Score = 134 bits (148), Expect = 1e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 |||||| || ||||| ||||| ||||||||||| | || | ||| |||||||| Sbjct 587 GTGTAGTGTTGATTCTTTTTGTATGTTGTAGTCAGATAGTGTACGTCCGTCTTCGAGCTG 646 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| |||||||||||||| |||||||| || || || || ||||| || |||||||| Sbjct 647 CTTGCCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCCTCTTTGTCCTGAATTTT 706 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 | ||| || || | || || |||||| ||||||||||| || |||||||| Sbjct 707 TGCTTTCACATTTTCGATCGTATCACTGCCTTCCACTTCGAGAGTAATTGTCTTACCGGT 766 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| || || |||||||| Sbjct 767 GAGCGTTTTCACAAATATTTGCAT 790 >seq26384 Length=2369 Score = 89.7 bits (98), Expect = 5e-13 Identities = 128/175 (73%), Gaps = 8/175 (5%) Strand=Plus/Plus Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291 |||||| |||||| ||||| ||| || || | || | |||| ||||||| || || || Sbjct 1119 CGCCATCATCGAAGCTCAAATCGAGACTGGAACCCCTTTCATGTTGTACAAGGATGCGTG 1178 Query 8292 CAACGCCAA---AAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGC 8348 ||| ||| || | |||| ||| | ||||||| ||| ||||||||||||| ||| | Sbjct 1179 CAATCGCAAGTCAAACCATCA--GCA-CTTGGGCACTATTCGTTGCAGCAATCTTTGCAC 1235 Query 8349 TGAAATTGTACAGTACAGCGCGCCCGAC-GAAGTGGCCGTTTGCAATCTAGCGTC 8402 |||||| || |||| || | | ||| ||| || ||||||||| |||| || Sbjct 1236 TGAAATAGTTGAGTATAGTTC-CAAGACGGAAACTGCTGTTTGCAATTTAGCCTC 1289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 502375245755760