Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09-
24] 478,538 sequences; 547,921,014 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq230146 134 1e-26
seq26384 89.7 5e-13
>seq230146
Length=915
Score = 134 bits (148), Expect = 1e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
|||||| || ||||| ||||| ||||||||||| | || | ||| ||||||||
Sbjct 587 GTGTAGTGTTGATTCTTTTTGTATGTTGTAGTCAGATAGTGTACGTCCGTCTTCGAGCTG 646
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||||| |||||||||||||| |||||||| || || || || ||||| || ||||||||
Sbjct 647 CTTGCCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCCTCTTTGTCCTGAATTTT 706
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
| ||| || || | || || |||||| ||||||||||| || ||||||||
Sbjct 707 TGCTTTCACATTTTCGATCGTATCACTGCCTTCCACTTCGAGAGTAATTGTCTTACCGGT 766
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
| ||||| || || ||||||||
Sbjct 767 GAGCGTTTTCACAAATATTTGCAT 790
>seq26384
Length=2369
Score = 89.7 bits (98), Expect = 5e-13
Identities = 128/175 (73%), Gaps = 8/175 (5%)
Strand=Plus/Plus
Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291
|||||| |||||| ||||| ||| || || | || | |||| ||||||| || || ||
Sbjct 1119 CGCCATCATCGAAGCTCAAATCGAGACTGGAACCCCTTTCATGTTGTACAAGGATGCGTG 1178
Query 8292 CAACGCCAA---AAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGC 8348
||| ||| || | |||| ||| | ||||||| ||| ||||||||||||| ||| |
Sbjct 1179 CAATCGCAAGTCAAACCATCA--GCA-CTTGGGCACTATTCGTTGCAGCAATCTTTGCAC 1235
Query 8349 TGAAATTGTACAGTACAGCGCGCCCGAC-GAAGTGGCCGTTTGCAATCTAGCGTC 8402
|||||| || |||| || | | ||| ||| || ||||||||| |||| ||
Sbjct 1236 TGAAATAGTTGAGTATAGTTC-CAAGACGGAAACTGCTGTTTGCAATTTAGCCTC 1289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 502375245755760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |