Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09-
24] 478,538 sequences; 547,921,014 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq230146 143 6e-29
>seq230146
Length=915
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||| || || || |||||||| ||||| || || | || || | ||| |||
Sbjct 579 AGGACCAAGTGTAGTGTTGATTCTTTTTGTATGTTGTAGTCAGATAGTGTACGTCCGTCT 638
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || || || | ||||| || || || |||| || || ||||||
Sbjct 639 TCGAGCTGCTTGCCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCCTCTTTGTCC 698
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| || ||| |||||| |||||||| || ||| || ||| || |||||||| || |||
Sbjct 699 TGAATTTTTGCTTTCACATTTTCGATCGTATCACTGCCTTCCACTTCGAGAGTAATTGTC 758
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || || ||||| | |||||
Sbjct 759 TTACCGGTGAGCGTTTTCACAAATATTTGCAT 790
Score = 91.5 bits (100), Expect = 3e-13
Identities = 82/103 (80%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
|| || ||||| || || |||||||| || || ||||||| ||||| | ||||| ||
Sbjct 810 ACCAGATGAAGGGTAGATTCTTTTTGTATATTGTAATCCGACAGGGTGCGCCCATCCTCG 869
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008
||||||||||| || || || ||||| |||||||| |||||||
Sbjct 870 AGCTGCTTGCCCGCAAAAATGAGGCGCTGTTGGTCGGGAGGAA 912
Score = 86.0 bits (94), Expect = 1e-11
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | |||||||||||| ||||| || ||||||||||| ||||| || | |||||
Sbjct 212 AGCACCAAGTGAAGAGTGGATTCTTTCTGAATGTTATAATCGGCAAGCGTTCGACCATCC 271
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGT 210992
|||| |||||| ||||| || || ||||||
Sbjct 272 TCCAACTGCTTTCCTGCAAAAATTAGGCGT 301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1152044928290370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |