Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq230146 143 6e-29 >seq230146 Length=915 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || || || |||||||| ||||| || || | || || | ||| ||| Sbjct 579 AGGACCAAGTGTAGTGTTGATTCTTTTTGTATGTTGTAGTCAGATAGTGTACGTCCGTCT 638 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || || || | ||||| || || || |||| || || |||||| Sbjct 639 TCGAGCTGCTTGCCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCCTCTTTGTCC 698 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || ||| |||||| |||||||| || ||| || ||| || |||||||| || ||| Sbjct 699 TGAATTTTTGCTTTCACATTTTCGATCGTATCACTGCCTTCCACTTCGAGAGTAATTGTC 758 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || ||||| | ||||| Sbjct 759 TTACCGGTGAGCGTTTTCACAAATATTTGCAT 790 Score = 91.5 bits (100), Expect = 3e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || || ||||| || || |||||||| || || ||||||| ||||| | ||||| || Sbjct 810 ACCAGATGAAGGGTAGATTCTTTTTGTATATTGTAATCCGACAGGGTGCGCCCATCCTCG 869 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 ||||||||||| || || || ||||| |||||||| ||||||| Sbjct 870 AGCTGCTTGCCCGCAAAAATGAGGCGCTGTTGGTCGGGAGGAA 912 Score = 86.0 bits (94), Expect = 1e-11 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||||||||| ||||| || ||||||||||| ||||| || | ||||| Sbjct 212 AGCACCAAGTGAAGAGTGGATTCTTTCTGAATGTTATAATCGGCAAGCGTTCGACCATCC 271 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGT 210992 |||| |||||| ||||| || || |||||| Sbjct 272 TCCAACTGCTTTCCTGCAAAAATTAGGCGT 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152044928290370