Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09-
24] 478,538 sequences; 547,921,014 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq31829 107 2e-18
>seq31829
Length=2224
Score = 107 bits (118), Expect = 2e-18
Identities = 195/283 (69%), Gaps = 2/283 (1%)
Strand=Plus/Minus
Query 4808 TGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTAT 4867
||| || | ||| |||||||| || || || ||||||||||| || || ||||| ||
Sbjct 2118 TGGATCCTTAATGTAAGTGTCGATGAGAAGAGAGTACATTTCAGAGTGAATGTTTTCGAT 2059
Query 4868 AGCAATCTGAAATCCGTAAAAGCATC-TAGCTTCTGTTACTTGAACTTCGTTACAAAATC 4926
|||||||| | ||||||||||| | || | || | || ||||| || | || || |
Sbjct 2058 GGCAATCTGCATACCGTAAAAGCAGCGTATC-TCCGGTATCTGAACCTCCTGACTGAAAC 2000
Query 4927 TTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAG 4986
||| | || || || ||| || || || || || || || || ||||| || | |
Sbjct 1999 GTTCAAGCAAATTCTCTAGTACGATCCCATCGCTTGCAGCGAAGAATGCCAAGACGTAGG 1940
Query 4987 ATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAAT 5046
| ||||| | | ||| | ||||| | ||||||| | ||| || || | | ||
Sbjct 1939 AGATAAAATGACGCTCGCCCACTTTAAGACTGCTCCAGTGCGACAAGTCCTTTGAAAGAT 1880
Query 5047 CAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTA 5089
|||| ||||| || ||||| || || || | ||||| |||||
Sbjct 1879 CAACCTCTTCTACTGTCCAGAAGGAGGCAACGGCTTTCTTGTA 1837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424558969063154
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |