Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09-
24] 478,538 sequences; 547,921,014 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq31829 109 8e-19
seq18524 98.7 1e-15
>seq31829
Length=2224
Score = 109 bits (120), Expect = 8e-19
Identities = 224/333 (67%), Gaps = 0/333 (0%)
Strand=Plus/Minus
Query 46890 ATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGC 46949
||| |||| || || || || | |||| |||||||| || ||||||||||| || ||
Sbjct 2115 ATCCTTAATGTAAGTGTCGATGAGAAGAGAGTACATTTCAGAGTGAATGTTTTCGATGGC 2056
Query 46950 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTC 47009
||||| | |||||||| || | | || | ||||| ||||| || || |||||
Sbjct 2055 AATCTGCATACCGTAAAAGCAGCGTATCTCCGGTATCTGAACCTCCTGACTGAAACGTTC 1996
Query 47010 AGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAAT 47069
| ||||||||| || || ||||| || ||||| || |||||||| || | ||
Sbjct 1995 AAGCAAATTCTCTAGTACGATCCCATCGCTTGCAGCGAAGAATGCCAAGACGTAGGAGAT 1936
Query 47070 AAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTAC 47129
||||| || | | || | |||||| | || ||||| | ||| ||
Sbjct 1935 AAAATGACGCTCGCCCACTTTAAGACTGCTCCAGTGCGACAAGTCCTTTGAAAGATCAAC 1876
Query 47130 TTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATA 47189
||||| |||||||||| || || | ||||| || || | | ||||| || | ||
Sbjct 1875 CTCTTCTACTGTCCAGAAGGAGGCAACGGCTTTCTTGTAAAATTGCCATACGTCGTGGTA 1816
Query 47190 TTGGATCGGAAAAATAACAAATCTATTTGGATT 47222
||| || ||||| | ||||| | || ||||||
Sbjct 1815 TTGTATTGGAAACAAGACAAAACGATGTGGATT 1783
>seq18524
Length=2666
Score = 98.7 bits (108), Expect = 1e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 76877 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCC 76936
|| || || ||||| |||| || || | ||| ||| |||| ||| ||||| || ||
Sbjct 730 CCAATACCGCCTGCATTTTTTGATATGATAGCGCAGTCCTTCAGTGTATCATATATACCT 671
Query 76937 TCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT 76996
|| || |||||| || | || | |||||||| || || |||||||| | | | |||
Sbjct 670 TCAATGCTATCACCCTTAATTGTGAGAAGAAAGCAACTTGACATTTGGGGTTTAGGAGTA 611
Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTAT 77056
|| || |||| || || || |||||||||||||| ||||| || | |||||||||
Sbjct 610 CCGCTGTTGAACAGAGTGGGCGAGGCATGAGTGAACCACTTTTCGGACATCAGATTGTAT 551
Query 77057 GT 77058
||
Sbjct 550 GT 549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 708669822476160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |