Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq230146 96.9 3e-15 >seq230146 Length=915 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| ||||| |||||| | ||||| || || ||||| | ||| |||| ||| Sbjct 790 ATGCAAATATTTGTGAAAACGCTCACCGGTAAGACAATTACTCTCGAAGTGGAAGGCAGT 731 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | | | | || ||| ||||||| |||||||| || |||| ||||| Sbjct 730 GATACGATCGAAAATGTGAAAGCAAAAATTCAGGACAAAGAGGGTATTCCACCAGATCAG 671 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGATTATA 111277 ||| | | |||| ||| ||||| || | ||||| | | ||||| | || || | Sbjct 670 CAACGTTTGATTTTTGCTGGCAAGCAGCTCGAAGACGGACGTACACTAT--CTGACTACA 613 Query 111278 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 | |||||||||||||| |||||||| || || | || |||| ||||| Sbjct 612 ACATACAAAAAGAATCAACACTACACTTGGTCCTCCGCTTGCGTGGTGG 564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419351120364688