Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq230146 145 2e-29 >seq230146 Length=915 Score = 145 bits (160), Expect = 2e-29 Identities = 156/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || |||||||| ||||| || || || || || ||||| |||||| || || Sbjct 787 CAAATATTTGTGAAAACGCTCACCGGTAAGACAATTACTCTCGAAGTGGAAGGCAGTGAT 728 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| ||| |||||||||||||| || || || || || |||||| Sbjct 727 ACGATCGAAAATGTGAAAGCAAAAATTCAGGACAAAGAGGGTATTCCACCAGATCAGCAA 668 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || || || ||||||||||| ||| | || || | || || ||| | Sbjct 667 CGTTTGATTTTTGCTGGCAAGCAGCTCGAAGACGGACGTACACTATCTGACTACAACATA 608 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||||||||||||||| || |||| Sbjct 607 CAAAAAGAATCAACACTACA-CTTG 584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1196350801262372