Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09- 25] 140,294 sequences; 531,434,409 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq7176 91.5 2e-13 >seq7176 Length=12423 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 70339 GGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCA 70398 ||| |||||||| ||||| ||||||||||||||| | | ||| | ||||| ||||| Sbjct 3417 GGGTCTCGGTGTGCCCTTCAACATTGCAAGCTATGCCCTACTGATGTTGATGATAGCTCA 3358 Query 70399 CATTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATTGGCGACGCTCACGTGTATTT 70458 ||||| || ||||| || ||| || || ||||| ||||| ||| ||| ||||| Sbjct 3357 TATTACAGGACTGAAGCCGGGCGATTTTGTCCACACAATTGGTGACTGTCATGTGTACAC 3298 Query 70459 AAATCACATCGAGCCATTAAAGG 70481 ||||||| ||| | ||| ||| Sbjct 3297 TAATCACAAAGAGGCCTTAGAGG 3275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739759623007440