Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09- 25] 140,294 sequences; 531,434,409 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq58369 87.8 2e-12 >seq58369 Length=2743 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055 ||| |||| |||||| || ||||| ||||| |||||||| ||| | ||| | ||| Sbjct 484 CAAGACCAGATGTAGGGTTGATTCCTTTTGAATGTTGTAGTCGGATAGAGTACGACCATC 425 Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115 ||| | ||| ||||| || |||| || | |||||| || || | || || || || Sbjct 424 TTCGAGTTGCTTGCCGGCGAAAATCAGTCGCTGTTGGTCCGGTGGGATCCCCTCCTTATC 365 Query 20116 GGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGT 20175 |||||| ||||| | ||| || || | ||||| |||| |||||| || Sbjct 364 TTGAATTTTAGCCTTCACGTTCTCAATTGAGTCACTGGGTTCGACCTCCAGGGTAATCGT 305 Query 20176 TTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| || | || || |||||||||||||| Sbjct 304 CTTGCCAGTAAGTGTCTTCACAAAAATTTGCAT 272 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || || | || || ||||| ||| || ||||| |||||||| || |||||||| Sbjct 726 CCACCGCGGAGCCGCAGCACCAGATGCAGAGTAGACTCTTTTTGAATATTGTAATCAGAG 667 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || ||| || | |||||| || || | || || || || ||||| ||| Sbjct 666 AGCGTACGGCCATCCTCGAGTTGTTTACCAGCGAAGATGAGTCTTTGCTGATCCGGGGGG 607 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||||||| ||||| ||| || | ||| ||| || | ||||| Sbjct 606 ATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGAGTCACTGGGTTCGACC 547 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| |||||| || || || |||| || || |||||||| ||||| Sbjct 546 TCCAGGGTAATCGTCTTACCAGTCAGGGTCTTCACAAAAATCTGCAT 500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418869775906614