Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09- 25] 140,294 sequences; 531,434,409 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq58369 109 5e-19 >seq58369 Length=2743 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| || || || || || || || |||||| | || || |||| Sbjct 500 ATGCAGATTTTTGTGAAGACCCTGACTGGTAAGACGATTACCCTGGAGGTCGAACCCAGT 559 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||| || ||| | || ||| ||||| || ||||||||| ||||| |||||| Sbjct 560 GACTCTATTGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATCCCCCCGGATCAG 619 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 |||||||| || | || || |||||| | || |||| | || | | ||||| || Sbjct 620 CAAAGACTCATCTTCGCTGGTAAACAACTCGAGGATGGCCGTACGCTCTCTGATTACAAT 679 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||||||||||||||||| | ||| ||||| || Sbjct 680 ATTCAAAAAGAGTCTACTCTGCATCTGGTGCTG 712 Score = 89.7 bits (98), Expect = 4e-13 Identities = 162/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || || || || ||| | || || ||||||||||| | || || |||| Sbjct 955 AATGCAGATATTCGTTAAGACGTTGACAGGCAAAACCATTACTCTGGAGGTCGAACCCAG 1014 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||| | ||| | | || || || || |||||||| || ||||| || || Sbjct 1015 TGACTCCATTGAAAATGTGAAGGCTAAGATCCAAGATAAAGAGGGTATCCCCCCGGACCA 1074 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| |||| || | || || |||||| ||||||||| | || | |||| || || Sbjct 1075 ACAACGACTGATATTCGCCGGTAAACAACTAGAAGATGGCCGCACGCTCTCCGACTACAA 1134 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAAACCACA 115521 || ||||||||||||||| | ||| ||||| || | | || || ||| || |||| Sbjct 1135 TATCCAAAAAGAGTCTACTCTGCATCTGGTGCTGCGTCTTCGTGGCGGATAATCACA 1191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424616732739280