Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09-
25] 140,294 sequences; 531,434,409 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq31935 123 2e-23
>seq31935
Length=5035
Score = 123 bits (136), Expect = 2e-23
Identities = 285/428 (67%), Gaps = 1/428 (0%)
Strand=Plus/Plus
Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957
|| || || || ||||| |||||||| ||||||||||||| |||| ||| | ||
Sbjct 1383 CCCACACTTTTTAACGCCGGGACCCCTATGCCACAGATGTCCAGTTGTTACCTTCTCACA 1442
Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017
| |||| |||| ||| || |||| || | | ||| | |||||| || ||
Sbjct 1443 ATGAAGGACGACAGCATTGAGGGCATTTATGATACATTGAAGCAGTGTGCGCTTATATCG 1502
Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077
||| | || || |||||||| ||| || ||| | || || |||| | | ||
Sbjct 1503 AAAAATGCTGGTGGAATCGGTCTCAACGTTCACTGTATCCGAAGCAAGGGTACTTTTATA 1562
Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137
|| || ||||| ||||| ||| | ||||| |||||||| |||||||||||| |
Sbjct 1563 GCGGGAACGAATGGAGAGTCCAATGGCTTGGTCCCAATGCTCCGCGTCTTCAACAACACA 1622
Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197
||||| ||||| ||||| ||||| | | | ||| | |||||| | || | |||
Sbjct 1623 GCGCGGTACGTCGACCAAGGTGGAAACAAGCGACCAGGTGCCTTCGCGATTTACTTGGAG 1682
Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257
|| |||||| | ||| | | | ||| | || || || || ||| ||| ||| |
Sbjct 1683 CCATGGCACCCAGACATTCTGCAGTTCGTAGAGCTACGCAAAAACACTGGCGCCGAAGAG 1742
Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT- 94316
|| || | || || ||| ||||| ||||| || ||| | |||||| ||||||
Sbjct 1743 ACTAGAGCTCGTGATCTTTTCATGGCTCTTTGGGTTCCTGACTTATTTATGCGACGCGTG 1802
Query 94317 CGAGaaaa 94324
||||| ||
Sbjct 1803 CGAGACAA 1810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 493855616292240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |