Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09- 25] 140,294 sequences; 531,434,409 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq31935 123 2e-23 >seq31935 Length=5035 Score = 123 bits (136), Expect = 2e-23 Identities = 285/428 (67%), Gaps = 1/428 (0%) Strand=Plus/Plus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || || || || ||||| |||||||| ||||||||||||| |||| ||| | || Sbjct 1383 CCCACACTTTTTAACGCCGGGACCCCTATGCCACAGATGTCCAGTTGTTACCTTCTCACA 1442 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| |||| ||| || |||| || | | ||| | |||||| || || Sbjct 1443 ATGAAGGACGACAGCATTGAGGGCATTTATGATACATTGAAGCAGTGTGCGCTTATATCG 1502 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 ||| | || || |||||||| ||| || ||| | || || |||| | | || Sbjct 1503 AAAAATGCTGGTGGAATCGGTCTCAACGTTCACTGTATCCGAAGCAAGGGTACTTTTATA 1562 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 || || ||||| ||||| ||| | ||||| |||||||| |||||||||||| | Sbjct 1563 GCGGGAACGAATGGAGAGTCCAATGGCTTGGTCCCAATGCTCCGCGTCTTCAACAACACA 1622 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 ||||| ||||| ||||| ||||| | | | ||| | |||||| | || | ||| Sbjct 1623 GCGCGGTACGTCGACCAAGGTGGAAACAAGCGACCAGGTGCCTTCGCGATTTACTTGGAG 1682 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||| | ||| | | | ||| | || || || || ||| ||| ||| | Sbjct 1683 CCATGGCACCCAGACATTCTGCAGTTCGTAGAGCTACGCAAAAACACTGGCGCCGAAGAG 1742 Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT- 94316 || || | || || ||| ||||| ||||| || ||| | |||||| |||||| Sbjct 1743 ACTAGAGCTCGTGATCTTTTCATGGCTCTTTGGGTTCCTGACTTATTTATGCGACGCGTG 1802 Query 94317 CGAGaaaa 94324 ||||| || Sbjct 1803 CGAGACAA 1810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 493855616292240