Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09- 25] 140,294 sequences; 531,434,409 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq36919 84.2 3e-11 >seq36919 Length=4449 Score = 84.2 bits (92), Expect = 3e-11 Identities = 174/255 (68%), Gaps = 8/255 (3%) Strand=Plus/Minus Query 37446 ATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGA 37505 ||||| || || || || | |||||| || || ||||||||||| || || ||||| Sbjct 2224 ATATACGTGTCGATAAGAAGGGAATACATCTCTGAATGAATATTTTCGATTGCAATCTGG 2165 Query 37506 AAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAG 37565 || ||||| ||||| | ||||| | | || || || | | || || | | Sbjct 2164 AAGCCATAGAAACAGCGGGCTTCTGGGATCTGTACTTCTTGACTGAAGTTCGCCACAAGA 2105 Query 37566 TTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATG- 37624 |||||||| ||||| || || || || ||||| || ||||| || ||| || || || Sbjct 2104 TTTTCATTTACTATTCCGTCGCTTGCGGCAAAAAAGGCAAGGACGTATGAAATGAAGTGC 2045 Query 37625 -TCT-TTCATCATTT-GATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTC 37681 ||| | || ||| || | || ||| ||| || ||||| | || |||||||| Sbjct 2044 TTCTCGCCGTCCTTTAGAGA----TTCCCAGTCACCAAGGTCTTTCGCCAAGTCAACTTC 1989 Query 37682 ATCAACGGTCCAAAA 37696 |||||||||||||| Sbjct 1988 TTCAACGGTCCAAAA 1974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591278068835760