Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09- 25] 140,294 sequences; 531,434,409 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq10820 104 3e-17 >seq10820 Length=10173 Score = 104 bits (114), Expect = 3e-17 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 47937 TGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAA 47996 |||||| || || ||||| || || || ||||| || || | |||| ||| |||||||| Sbjct 1573 TGCTCTGGTTATTTTACGGGTAACGAACGTTTCGCCCCGGCGTGGACTTTCGTGATTAAA 1514 Query 47997 AAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTA 48056 || || ||| | || |||||||| || || | |||||||||||| || |||||||| Sbjct 1513 TAGGATTCCATTGCATGCATACATCCCATAGGCTTCACGATAGTTTACAACAATCCAGTA 1454 Query 48057 CCCATAGAGTTTTGCANNACC 48077 | |||||||||||| ||| Sbjct 1453 AGCGTAGAGTTTTGCACAACC 1433 Score = 95.1 bits (104), Expect = 2e-14 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 48075 ACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTT 48134 |||||| ||||| ||||||||||| || || ||||| ||||||| || || || ||||| Sbjct 986 ACCATATGGAGAGCGTGGATAGAATGGAGTCGTCTCCTTCTGTGGTGTTTCCTGGACCTT 927 Query 48135 ACCATAAAGTTCACTGGTGGATGCTTGATA 48164 ||||||||||||||||| || || ||||| Sbjct 926 TCCATAAAGTTCACTGGTTGAGGCCTGATA 897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 664327339108080