Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09- 25] 140,294 sequences; 531,434,409 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq10820 82.4 9e-11 >seq10820 Length=10173 Score = 82.4 bits (90), Expect = 9e-11 Identities = 115/160 (72%), Gaps = 6/160 (4%) Strand=Plus/Minus Query 177554 ACATTTCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAG 177613 || |||||||||||| | ||| | ||| ||||| || | | | ||||| ||| | | Sbjct 2706 ACTTTTCAACAAACTCGCGCACTGTGTGAGTCTCTCCAGATGAAATGACATAATCAACTG 2647 Query 177614 CCTCTTCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGT 177673 || | |||||| |||||||||||||| || | || ||||| | ||| | |||||||| Sbjct 2646 GTTCCTTTTGTTGTAGCATGAGCCACATTGCGTAGACGTAGTCTTCGGCGTAACCCCAGT 2587 Query 177674 C---TCTGGCAGCGTTGAGGTTACCGAGTTCAAGGAACTC 177710 | | ||||| || ||||| || || |||| ||||| Sbjct 2586 CGCGTTTGGCA---TTTAGGTTGCCCAGCTCAATTAACTC 2550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595523410806720