Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09- 25] 140,294 sequences; 531,434,409 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq58369 96.9 5e-15 >seq58369 Length=2743 Score = 96.9 bits (106), Expect = 5e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| ||||| |||| || ||||| || ||||| ||||| | || |||||| Sbjct 955 AATGCAGATATTCGTTAAGACGTTGACAGGCAAAACCATTACTCTGGAGGTCGAACCCAG 1014 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| ||| ||| ||||| ||| || ||||||||||| || || || || || || Sbjct 1015 TGACTCCATTGAAAATGTGAAGGCTAAGATCCAAGATAAAGAGGGTATCCCCCCGGACCA 1074 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||| || |||| | |||||||| || || |||||| | | || | || || || || Sbjct 1075 ACAACGACTGATATTCGCCGGTAAACAACTAGAAGATGGCCGCACGCTCTCCGACTACAA 1134 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 ||| |||||| | || || ||| | ||| Sbjct 1135 TATCCAAAAAGAGTCTACTCTGCATCTGGTG 1165 Score = 86.0 bits (94), Expect = 9e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || ||||||| || || ||||| | || |||||| | Sbjct 500 ATGCAGATTTTTGTGAAGACCCTGACTGGTAAGACGATTACCCTGGAGGTCGAACCCAGT 559 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || |||| || || ||| ||||| ||||| ||||||||||| || || || || Sbjct 560 GACTCTATTGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATCCCCCCGGATCAG 619 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 |||||| | || | || ||||| || ||||| ||| | | || | || ||||| ||| Sbjct 620 CAAAGACTCATCTTCGCTGGTAAACAACTCGAGGATGGCCGTACGCTCTCTGATTACAAT 679 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 || |||||| | || || ||| | ||| Sbjct 680 ATTCAAAAAGAGTCTACTCTGCATCTGGTG 709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 730588534370400