Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09- 25] 140,294 sequences; 531,434,409 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq6225 91.5 4e-13 >seq6225 Length=13228 Score = 91.5 bits (100), Expect = 4e-13 Identities = 219/326 (67%), Gaps = 4/326 (1%) Strand=Plus/Minus Query 302574 TTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGT 302633 ||||||| || || | ||||||||| || ||||||||| | ||| || ||||| || Sbjct 4671 TTCCATAGCTTTAATAAGACGACGCTGGATGTAACCAGTTTCGGCTGTCTTCACAGCAGT 4612 Query 302634 ATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCC 302693 ||| || ||||| ||||||||||||| || || ||||| | || ||| || || Sbjct 4611 ATCGATGAGACCTTCACGACCACCCATGGCGTGAAAGAAAAATTCAGTGGGTGTCAGACC 4552 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGG-TAA 302752 ||| | ||| |||| || || || | | |||||| || || | ||||| | | Sbjct 4551 AGCAAGGTAAGAGTTCTCTACAAATCCCCTGGACTCGGGACCATAATC-ATCTTGGATGA 4493 Query 302753 AGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCT 302812 ||||||| || || | | | || | || || || || || || |||||||| | Sbjct 4492 AGTGTGGTAGAGTTCGATGGCGGAAACCAAAGGGAATTCGTTTGCCCTCGACGTTCTGTT 4433 Query 302813 GTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCAC-TGCCCTTGGAGCCAGCATTT 302871 | || | || | ||| | ||||| ||| |||| | | ||||||||||| || Sbjct 4432 GACCGACACAGGCAATAACTTGCGAGATA-TTAATGCGCGAACCCTTGGAGCCGGCGACG 4374 Query 302872 ACCATAATAACAAACCTGTTATTCTT 302897 |||||||| || |||||| ||| Sbjct 4373 ACCATAATGTTGAAGTTGTTATACTT 4348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1469171983027078