Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09- 25] 140,294 sequences; 531,434,409 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq17644 95.1 1e-13 >seq17644 Length=7709 Score = 95.1 bits (104), Expect = 1e-13 Identities = 147/209 (70%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTC---GCGCGTGC 1254399 || ||||||| || || ||| || ||| | ||||||||||||||||| || ||| Sbjct 3365 GCTTGGCCAGCTCACCCGGCAGGAGCAGCCTGACGGCGGTCTGGATCTCTCTGCTGGTGA 3306 Query 1254400 CGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459 | ||| || |||||| |||| | || |||| | ||| | | |||| | |||| Sbjct 3305 TGGTCGACTT---CTTGTTGTAGTGGGAGAGGCGGCTAGACTCCGCGGCGATTCTCTCGA 3249 Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519 |||||||| || || |||||||||| ||||| | ||| |||||||| ||||| Sbjct 3248 AGATGTCGTTCACGAAGGAGTTCATGATGGACATGGCCTTCGATGAGATGCCGGTGTCGG 3189 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||| ||||| | || ||||||||| Sbjct 3188 GGTGAACCTGACGCAAGACTTTGTAGATG 3160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6095626017363198