Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09- 25] 140,294 sequences; 531,434,409 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq58369 96.9 3e-15 >seq58369 Length=2743 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| || ||| | ||||||||||| |||||| |||| |||||| | Sbjct 272 ATGCAAATTTTTGTGAAGACACTTACTGGCAAGACGATTACCCTGGAGGTCGAACCCAGT 331 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | ||||| |||||| || || || || | || || ||| Sbjct 332 GACTCAATTGAGAACGTGAAGGCTAAAATTCAAGATAAGGAGGGGATCCCACCGGACCAA 391 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | || |||| || ||||| ||| | |||||| | ||| | ||| |||||| Sbjct 392 CAGCGACTGATTTTCGCCGGCAAGCAACTCGAAGATGGTCGTACTCTATCCGACTACAAC 451 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || ||||| ||||| || |||||| | || ||| Sbjct 452 ATTCAAAAGGAATCAACCCTACATCTGGTCTTG 484 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| |||||||| || || ||||||| ||||| |||||| |||| |||||| | Sbjct 500 ATGCAGATTTTTGTGAAGACCCTGACTGGTAAGACGATTACCCTGGAGGTCGAACCCAGT 559 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || ||| ||| | || ||| ||||| |||||||||||| | ||| ||||| Sbjct 560 GACTCTATTGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATCCCCCCGGATCAG 619 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| || || | || || |||||| | || ||| || | |||||||| Sbjct 620 CAAAGACTCATCTTCGCTGGTAAACAACTCGAGGATGGCCGTACGCTCTCTGATTACAAT 679 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || |||||||| ||||| || ||| | || || || | || || || Sbjct 680 ATTCAAAAAGAGTCTACTCTGCATCTGGTGCTGCGGCTCCGCGGTGG 726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401641683522752