Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09- 25] 140,294 sequences; 531,434,409 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq7124 89.7 4e-13 >seq7124 Length=12460 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || || ||| || || ||||| || || | ||||| || |||| || Sbjct 7316 ACCAAGTGCAGGGTCGACTCCTTCTGGATATTGTAGTCCGAGAGTGTACGACCGTCCTCC 7257 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| ||||| || || ||||||||||| | || | || || || ||| || Sbjct 7256 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGAGGAATGCCTTCCTTATCC-TG 7198 Query 39196 ATTTTCTG-TTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 | | | || || | | | | | || |||| ||||| |||| |||||| | || Sbjct 7197 AATCTTTGCCTTCACATTTTCGATAGAGTCACTCGGTTCCACCTCCAACGTGATGGTCTT 7138 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 || ||||| || || ||||||||||||||| Sbjct 7137 GCCAGTCAGTGTCTTCACAAAGATTTGCATC 7107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428811148704422