Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq610803 122 9e-23 seq623066 96.9 4e-15 seq21289 96.9 4e-15 seq629926 93.3 4e-14 seq105517 91.5 2e-13 >seq610803 Length=1907 Score = 122 bits (134), Expect = 9e-23 Identities = 410/641 (64%), Gaps = 62/641 (10%) Strand=Plus/Minus Query 16946 AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGT 17005 |||| ||||||||||| ||| || ||||| ||||| | || || |||||||| || | | Sbjct 1282 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAAT 1223 Query 17006 TCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCG 17065 ||||| ||| | ||| || |||||| ||| ||||| |||||||||||||| | || Sbjct 1222 TCGTTGCTAAACGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAATATTGATGCA 1163 Query 17066 AACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATC--GTTCGGCGT 17123 || ||| ||| ||||| || || |||| ||| || || | || || |||| || Sbjct 1162 AAACTTCCACTAAAAAATATCCCTTCAACGGCTGCGAAAGCAACTACTCGAGTTC--CGA 1105 Query 17124 ACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAAT 17183 | | | || || | | ||||| |||| | |||||| | | | || Sbjct 1104 AATTTGAGTGCTTATCATTTATCCAACGTAAAGCCCATTGGGCTTTCTTTTGAACACATG 1045 Query 17184 CCATCGTTTCTATGGCCTTAAATAATTTCTC-----------TTT--------------- 17217 ||| ||||| || || |||||||| || || ||| Sbjct 1044 GCATTGTTTCAATAGCATTAAATAAGTTATCCCTGTAAAATATTTTATCACAAACAAAAC 985 Query 17218 -TTCCTGTAGG-------------------TCGATTATATACGTATCGATGAGTAGGCTG 17257 ||| | || | ||| | ||||| | |||||| | || | | Sbjct 984 ATTCATTTAAGCATTTACTTGGCTTTACTATCGGTGATATATGAATCGATTAATAAGGAG 925 Query 17258 TACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAA-GCATCGGGCTTC 17316 |||||||| ||||| ||||| || ||||| || ||||| | ||||| || || |||||| Sbjct 924 TACATTTCTGAGTGAATGTTTTCAATGGCAATTTGAAAACTATAAAATGCTTC-GGCTTC 866 Query 17317 CGCTATTTGAACTTCCACGTAGAAT----CGTTCCGCTAGATTTTCGTTCACGATGCCGT 17372 | || | |||||| | |||| |||||| | ||||||||||| || || || | Sbjct 865 GGGAATCTTAACTTC----TTGAATAAACCGTTCCACGAGATTTTCGTTTACTATTCCAT 810 Query 17373 CGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAA 17432 | || || || |||||||| | | |||| ||| ||||| ||| | ||| | Sbjct 809 CACTAGCTGCAAAAAACGCAAGAACATGCGAAATAAAATAACGTTCATTTTCTGTTAACT 750 Query 17433 CGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCA 17492 ||| | |||||||| |||| ||| ||||| | |||| ||||| | Sbjct 749 TTTTCCAATGAGCAAAATCTTTTGATAAATCAACTTCATTTACCGTCC-AAAACGATGAT 691 Query 17493 CT-GCCTTTTTATACATATTCCAAATATCATTGTATTGTAT 17532 || ||||| ||| |||||| ||||||||||| ||| | ||| Sbjct 690 CTAGCCTTGTTAAACATATCCCAAATATCATCGTACTCTAT 650 >seq623066 Length=2774 Score = 96.9 bits (106), Expect = 4e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 16946 AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGT 17005 |||| ||||||||||| ||| || ||||| ||||| | || || |||||||| || | | Sbjct 1606 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAAT 1547 Query 17006 TCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATAT 17058 ||||| ||||| ||| || |||||| ||| ||||| ||||||||||| || Sbjct 1546 TCGTTGCTAAATGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAACAT 1494 >seq21289 Length=371 Score = 96.9 bits (106), Expect = 4e-15 Identities = 76/91 (84%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 119949 TCCATTCCAGTAtttttttAGCCCAGTACATACGTAAGTATCCATGCATTTTACCTTCAC 120008 ||||||| || || || |||||||||||||| || | ||||||||||||| ||||| | Sbjct 134 TCCATTCTAGAATCTTCTTAGCCCAGTACATTCGAAGAAATCCATGCATTTTTCCTTCTC 75 Query 120009 GAACCATTTGAAGTTGTGCGGCGTTCCATAA 120039 ||||||||| | ||||||||| |||||||| Sbjct 74 TAACCATTTGTAATTGTGCGGCATTCCATAA 44 >seq629926 Length=3335 Score = 93.3 bits (102), Expect = 4e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 16946 AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGT 17005 |||| ||||||||||| ||| || ||||| ||||| | || || |||||||| || | | Sbjct 2690 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATCAAT 2631 Query 17006 TCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCG 17065 |||||| ||| | || || |||||| ||| ||||| || ||||||||||| | || Sbjct 2630 TCGTTACTAAAAGATAATCCCGGCATCAATCCACGTTTTTTCAACCAAAATATTGACGCA 2571 Query 17066 AACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGC 17106 || ||| || ||||| || || || | ||||| || Sbjct 2570 AAACTTCCACTGAAAAATATCCCTTCAACAGCAGCAAAAGC 2530 >seq105517 Length=321 Score = 91.5 bits (100), Expect = 2e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 16946 AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGT 17005 |||| ||||||||||| ||| || ||||| ||||| | || || ||||| || || | | Sbjct 318 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAAT 259 Query 17006 TCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCG 17065 ||||| ||| | ||| || |||||| ||| ||||| ||||||||||| || || Sbjct 258 TCGTTGCTAAAAGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAAAATTAATGCA 199 Query 17066 AACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCG 17115 || ||| ||| ||||| || || || | ||| || || | || ||| Sbjct 198 AAACTTCCACTAAAAAATATCCCTTCAACAGCTGCGAAAGCAACTACTCG 149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513349637863920