Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_001824.1 Length=102653 Score E Sequences producing significant alignments: (Bits) Value seq319734 93.3 3e-14 seq470918 89.7 3e-13 >seq319734 Length=610 Score = 93.3 bits (102), Expect = 3e-14 Identities = 127/175 (73%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 12784 GTCATGCGACTAGGAAAGGCATGTGGGTTAATGATTAAATCAGGTACTATGCCATCTTTA 12843 ||||| |||||||||| || ||||| ||||| || | || ||| || || || | Sbjct 206 GTCATACGACTAGGAATAGCGTGTGGATTAATAATAATGTCTGGTGTCATACCTTCACAA 147 Query 12844 GTGAAAGGCATGTTTTCTTGGGCATAAATCATACCACAGGTACCTTTTTGTGCGGTAAAA 12903 |||| ||||||| |||||| || | |||||||| ||||||||||| || | Sbjct 146 TTGAAGGGCATGTCTTCTTGTCTGTATCTGATACCACATGTACCTTTTTGGCCGTGACGT 87 Query 12904 GAAGCAAATTTATCTCCTATTTCAGGTATTTTTGGAGATCGTAATT-TAATTTTA 12957 |||||||||||||| || |||| || || |||| | || ||||| | |||||| Sbjct 86 GAAGCAAATTTATCGCCAATTTGTGGAATCTTTGTGGTTC-TAATTCTGATTTTA 33 >seq470918 Length=1914 Score = 89.7 bits (98), Expect = 3e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 12784 GTCATGCGACTAGGAAAGGCATGTGGGTTAATGATTAAATCAGGTACTATGCCATCTTTA 12843 ||||| ||||| |||| || ||||| |||||||| | ||| || ||| || || | Sbjct 845 GTCATTCGACTGGGAATAGCGTGTGGATTAATGATAATATCCGGAGTTATACCTTCACTG 904 Query 12844 GTGAAAGGCATGTTTTCTTGGGCATAAATCATACCACAGGTACCTTTTTGTGCGGTAAAA 12903 ||||| ||||| | ||| || || | |||||||| ||||||||||| || | Sbjct 905 GTGAATGGCATATCTTCCTGCCTGTACCTGATACCACATGTACCTTTTTGACCGTGACGT 964 Query 12904 GAAGCAAATTTATCTCCTATTTCAGGTATTTTTG 12937 || ||||||||||| || |||| || ||||||| Sbjct 965 GAGGCAAATTTATCACCGATTTGTGGGATTTTTG 998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325769161836076