Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq610803 210 2e-49 seq629926 192 5e-44 seq623066 179 3e-40 seq105517 104 2e-17 >seq610803 Length=1907 Score = 210 bits (232), Expect = 2e-49 Identities = 418/624 (67%), Gaps = 50/624 (8%) Strand=Plus/Minus Query 16222 TTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTT 16281 ||||||||| | ||| |||||||||||||| | ||||| || || || ||||| ||||| Sbjct 1277 TTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAATTCGTT 1218 Query 16282 TGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGA 16341 ||| | | || ||||| | ||| |||||||| | ||||||||| | ||||| Sbjct 1217 GCTAAACGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAATATTGATGCAAAACT 1158 Query 16342 ACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCT 16401 ||| ||| ||||| |||||||| || || || ||||| | ||| ||| | || Sbjct 1157 TCCACTAAAAAATATCCCTTCAACGGCTGCGAAAGCAACTACTCGAGTTCCGAAATTTGA 1098 Query 16402 AtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTT 16461 | ||| | |||||| | |||||| | ||||| | || |||||| ||| | Sbjct 1097 GTGCTTATCATTTATCCAACGTAAAGCCCATTGGGCTTTCTTTTGAACACATGGCATTGT 1038 Query 16462 CTCTATTGCATTAAATAAATAAt-----------------------------------tt 16486 || || ||||||||||| | || || Sbjct 1037 TTCAATAGCATTAAATAAGTTATCCCTGTAAAATATTTTATCACAAACAAAACATTCATT 978 Query 16487 t-----ttt------CTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTT 16535 | ||| |||| ||||| ||||| | ||| |||| ||| ||||||| Sbjct 977 TAAGCATTTACTTGGCTTTACTATCGGTGATATATGAATCGATTAATAAGGAGTACATTT 918 Query 16536 CTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAA-GCATCTAGCTTCGGATATT 16594 |||| ||||| || || || || || ||||||| |||||| || || ||||||| || Sbjct 917 CTGAGTGAATGTTTTCAATGGCAATTTGAAAACTATAAAATGCTTCG-GCTTCGGGAATC 859 Query 16595 TGTACTTCA-GAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGC 16653 | ||||| || |||| || ||| | | |||||||| ||||||||||| |||||||| Sbjct 858 TTAACTTCTTGAATAAA-CCGTTCCACGAGATTTTCGTTTACTATTCCATCACTAGCTGC 800 Query 16654 AAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTGAAAGTTTTAACCAGTC 16713 |||||||||||| | || |||||||| ||| || |||| | ||| ||| | Sbjct 799 AAAAAACGCAAGAACATGCGAAATAAAATAACGTTCATTTTCTGTTAACTTTTTCCAATG 740 Query 16714 AGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTT 16773 || |||||||||||||||||| || || | ||| |||||||| || | |||||| || Sbjct 739 AGCAAAATCTTTTGATAAATCAACTTCATTTACCGTCCAAAACGATGATCTAGCCTTGTT 680 Query 16774 ATACATTTTCCATATGTCTTCGTA 16797 | |||| | ||| || || ||||| Sbjct 679 AAACATATCCCAAATATCATCGTA 656 >seq629926 Length=3335 Score = 192 bits (212), Expect = 5e-44 Identities = 412/622 (66%), Gaps = 54/622 (9%) Strand=Plus/Minus Query 16222 TTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTT 16281 ||||||||| | ||| |||||||||||||| | ||||| || || || || || ||||| Sbjct 2685 TTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATCAATTCGTT 2626 Query 16282 TGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGA 16341 ||| | | || ||||| | ||| |||||||| | ||||||||| | ||||| Sbjct 2625 ACTAAAAGATAATCCCGGCATCAATCCACGTTTTTTCAACCAAAATATTGACGCAAAACT 2566 Query 16342 ACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCT 16401 ||| || ||||| |||||||| || ||||| ||||| | ||| || | || Sbjct 2565 TCCACTGAAAAATATCCCTTCAACAGCAGCAAAAGCAACAATTCGAATTCCAAAATTTGA 2506 Query 16402 AtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTT 16461 | |||| | ||||| | | ||||| | ||||||| | |||||| ||| | Sbjct 2505 CTGTTTATCATTAATCCAATGTAACGCCCATTGGGCTTTTTTATGAACACATGGCATTGT 2446 Query 16462 CTCTATTGCATTAAATAAAT------------AAtttttttCT----------------- 16492 || || |||||||| || | |||| || | | Sbjct 2445 TTCAATAGCATTAAACAAGTTGTTCCTGTTGAAATTCTTATATCATAGCAAGATACGAAT 2386 Query 16493 -------------------TTGC--TATCTAAAATATAAGTATCTATTAGTAAACTATAC 16531 || | |||| ||| || | ||| |||| || | |||| Sbjct 2385 GATTAACTTTCATACTTAGTTTCATTATCGGTAATGTAGGAATCAATTAATACAGAATAC 2326 Query 16532 ATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAA-GCATCTAGCTTCGGA 16590 ||||| |||||||||||||| || || || ||||||| ||||| || || |||||| | Sbjct 2325 ATTTCCGAATGAATATTCTCAATAGCAATTTGAAAACTGTAAAATGCTTC-AGCTTCAGG 2267 Query 16591 TATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGC 16650 |||| | ||| | ||| ||| || | | ||||| || ||||||||||| ||||| Sbjct 2266 AATTTTAATTTCTTGGATAAATCTTCCTACAAGATTTTCATTCACTATTCCATCACTAGC 2207 Query 16651 TGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTG-AAAGTTTTAACC 16709 ||||||||||| || | |||| |||||||| | ||| || |||| ||||| | || Sbjct 2206 TGCAAAAAACGAGAGAACGTGTGAAATAAAATATCGTTCATTTTCTGTCAAGTTAT-TCC 2148 Query 16710 AGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCT 16769 | |||| ||||||||| |||||||| || || | ||||| |||||| |||| ||||| Sbjct 2147 AATCAGCAAAATCTTTGGATAAATCAACTTCATTTACAGACCAAAATGAAGATCTAGCCT 2088 Query 16770 TTTTATACATTTTCCATATGTC 16791 | ||| |||| | ||| ||||| Sbjct 2087 TATTAAACATATCCCAAATGTC 2066 >seq623066 Length=2774 Score = 179 bits (198), Expect = 3e-40 Identities = 408/621 (66%), Gaps = 46/621 (7%) Strand=Plus/Minus Query 16222 TTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTT 16281 ||||||||| | ||| |||||||||||||| | ||||| || || || ||||| ||||| Sbjct 1601 TTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAATTCGTT 1542 Query 16282 TGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGA 16341 ||||| | || ||||| | ||| |||||||| | |||||| || ||||| Sbjct 1541 GCTAAATGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAACATTAATGCAAAACT 1482 Query 16342 ACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCT 16401 ||| ||| ||||| |||||||| | || || ||||| | ||| | | | || Sbjct 1481 TCCACTAAAAAATATCCCTTCAACAACTGCGAAAGCAACTACTCGAGTTCTGAAATTTGA 1422 Query 16402 Atttttactttctatccattttttagc-ccaatttgctttttgtttAACACAGTTCATGT 16460 | ||| | |||||| | ||| ||| | ||||| | || | |||| ||| Sbjct 1421 GTACTTATCATTTATCCAACGTAAAGCTCCACTGGGCTTTCTTTTGAGCACATGGCATTG 1362 Query 16461 TCTCTATTGCATTAAATAA-----------------------------ATAAttttttt- 16490 | || || ||||||||||| || |||| ||| Sbjct 1361 TTTCAATAGCATTAAATAAGTTATCCCCTTAAAATATTTTATCACAAAATCATTTATTTA 1302 Query 16491 -------------CTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCT 16537 |||| |||||| ||||| | || |||| ||| ||||||||| Sbjct 1301 AGCCTTTACTTGACTTTACTATCTGTGATATATGAGTCGATTAATAAGGAGTACATTTCT 1242 Query 16538 GAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGT 16597 || ||||| || || | || || ||||||| |||||| | ||||| | || | Sbjct 1241 GAGTGAATGTTTTCATTAGCAATTTGAAAACTATAAAATACTTCGGCTTCAGGAATCTAA 1182 Query 16598 ACTTCA-GAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAA 16656 ||||| || |||| | || | | | |||||||| ||||||||||| |||| |||||| Sbjct 1181 ACTTCTTGAATAAACCATTCCAGGAGA-TTTTCGTTTACTATTCCATCACTAGATGCAAA 1123 Query 16657 AAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTGAAAGTTTTAACCAGTCAGA 16716 ||||||||| | || |||||| | ||| || |||| || ||| ||| | || Sbjct 1122 AAACGCAAGAACATGCGAAATAAATTAACGTTCATTTTCTGTAAACTTTTTCCAATGAGC 1063 Query 16717 AAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATA 16776 ||||||||||||||||||||| | | ||| |||||||| || | |||||| ||| | Sbjct 1062 AAAATCTTTTGATAAATCGACTCCATTTACCGTCCAAAACGATGATCTAGCCTTGTTAAA 1003 Query 16777 CATTTTCCATATGTCTTCGTA 16797 ||||| ||| || || ||||| Sbjct 1002 CATTTCCCAAATATCATCGTA 982 >seq105517 Length=321 Score = 104 bits (114), Expect = 2e-17 Identities = 122/165 (74%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 16222 TTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTT 16281 ||||||||| | ||| |||||||||||||| | ||||| || ||||| ||||| ||||| Sbjct 313 TTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTT 254 Query 16282 TGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGA 16341 ||| | | || ||||| | ||| |||||||| | |||||| || ||||| Sbjct 253 GCTAAAAGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAAAATTAATGCAAAACT 194 Query 16342 ACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCG 16386 ||| ||| ||||| |||||||| || || || ||||| | ||| Sbjct 193 TCCACTAAAAAATATCCCTTCAACAGCTGCGAAAGCAACTACTCG 149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458762218648400