Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq629926 210 2e-49 seq610803 194 2e-44 seq623066 165 8e-36 seq105517 154 1e-32 >seq629926 Length=3335 Score = 210 bits (232), Expect = 2e-49 Identities = 422/634 (67%), Gaps = 54/634 (9%) Strand=Plus/Minus Query 14186 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 14245 |||| |||||| || ||||| ||||||||||||||||| || |||||||| ||||| | | Sbjct 2690 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATCAAT 2631 Query 14246 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 14305 ||||| ||| | |||||| ||||||||||| |||||||| ||||||||||||| || Sbjct 2630 TCGTTACTAAAAGATAATCCCGGCATCAATCCACGTTTTTTCAACCAAAATATTGACGCA 2571 Query 14306 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14365 || ||| || ||||| || ||||| |||||||| || | | ||| |||||| Sbjct 2570 AAACTTCCACTGAAAAATATCCCTTCAACAGCAGCAAAAGCAACAATTCGAATTCCAAAA 2511 Query 14366 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14425 || | ||| | ||||| | | ||||||| | |||||| | || | | | Sbjct 2510 TTTGACTGTTTATCATTAATCCAATGTAACGCCCATTGGGCTTTTTTATGAACACATGGC 2451 Query 14426 ATTGTTTCAATAGCATTAAATAA-ATGTTCC--------TTCT----------------- 14459 |||||||||||||||||||| || |||||| |||| Sbjct 2450 ATTGTTTCAATAGCATTAAACAAGTTGTTCCTGTTGAAATTCTTATATCATAGCAAGATA 2391 Query 14460 -----------CTTTAGTACTT-------------GAAATGTATGTATCAATAAGTAAGC 14495 |||| ||||| | |||||| | |||||| | || Sbjct 2390 CGAATGATTAACTTTCATACTTAGTTTCATTATCGGTAATGTAGGAATCAATTAATACAG 2331 Query 14496 TATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTT 14555 ||||||||| || || || || || ||||| || ||||||| ||||| | ||||| Sbjct 2330 AATACATTTCCGAATGAATATTCTCAATAGCAATTTGAAAACTGTAAAATGCTTCAGCTT 2271 Query 14556 CTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCAC 14615 | | || | ||| | ||||||| | | | ||||||||| ||||| ||||||| Sbjct 2270 CAGGAATTTTAATTTCTTGGATAAATCTTCCTACAAGATTTTCATTCACTATTCCATCAC 2211 Query 14616 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTG--AGTTT 14673 ||||||||||||| | | | || | |||||| ||| | || | || ||| | || Sbjct 2210 TAGCTGCAAAAAACGAGAGAACGTGTGAAATAAAATATCGTTCAT--TTTCTGTCAAGTT 2153 Query 14674 TTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAAC 14733 |||||||| || ||||| || || | ||| ||||||| || | |||||| || Sbjct 2152 ATTCCAATCAGCAAAATCTTTGGATAAATCAACTTCATTTACAGACCAAAATGAAGATCT 2093 Query 14734 AGCTTTTTTATACATTACCCATATTTCTTTATAT 14767 ||| || ||| |||| |||| || || ||| || Sbjct 2092 AGCCTTATTAAACATATCCCAAATGTCATTAAAT 2059 >seq610803 Length=1907 Score = 194 bits (214), Expect = 2e-44 Identities = 417/625 (67%), Gaps = 54/625 (9%) Strand=Plus/Minus Query 14186 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 14245 |||| |||||| || ||||| ||||||||||||||||| || |||||||| ||||| | | Sbjct 1282 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAAT 1223 Query 14246 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 14305 ||||| ||| | ||||| ||||||||||| |||||||||||||||||||||| || Sbjct 1222 TCGTTGCTAAACGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAATATTGATGCA 1163 Query 14306 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14365 || ||| ||| ||||| || ||||| || || || || | || ||| ||| || Sbjct 1162 AAACTTCCACTAAAAAATATCCCTTCAACGGCTGCGAAAGCAACTACTCGAGTTCCGAAA 1103 Query 14366 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14425 || | || | |||||| | |||||||| | ||| |||| || | | | Sbjct 1102 TTTGAGTGCTTATCATTTATCCAACGTAAAGCCCATTGGGCTTTCTTTTGAACACATGGC 1043 Query 14426 ATTGTTTCAATAGCATTAAATAAATGTTCC------------TTCTC------------- 14460 ||||||||||||||||||||||| | ||| || || Sbjct 1042 ATTGTTTCAATAGCATTAAATAAGTTATCCCTGTAAAATATTTTATCACAAACAAAACAT 983 Query 14461 ---TTTA-----GTACTT-------------GAAATGTATGTATCAATAAGTAAGCTATA 14499 |||| ||||| | || |||| ||| || | |||| || Sbjct 982 TCATTTAAGCATTTACTTGGCTTTACTATCGGTGATATATGAATCGATTAATAAGGAGTA 923 Query 14500 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGA 14559 |||||| ||||| |||||||| || || || ||||||| |||||| | ||||| | Sbjct 922 CATTTCTGAGTGAATGTTTTCAATGGCAATTTGAAAACTATAAAATGCTTCGGCTTCGGG 863 Query 14560 CCATTGTACCTC-TGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAG 14618 | || || ||| | ||| | ||| | | |||||| || ||||| |||||||||| Sbjct 862 AATCTTAACTTCTTGAAT-AAACCGTTCCACGAGATTTTCGTTTACTATTCCATCACTAG 804 Query 14619 CTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTG--AGTTTTTT 14676 |||||||||| || | | | |||||| || | || | || ||| | ||||| Sbjct 803 CTGCAAAAAACGCAAGAACATGCGAAATAAAATAACGTTCAT--TTTCTGTTAACTTTTT 746 Query 14677 CCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAAC-AG 14735 ||||| || ||||| || || | ||| ||||||| || |||| ||||| | | | || Sbjct 745 CCAATGAGCAAAATCTTTTGATAAATCAACTTCATTTACCGTCC-AAAACGATGATCTAG 687 Query 14736 CTTTTTTATACATTACCCATATTTC 14760 | || ||| |||| |||| || || Sbjct 686 CCTTGTTAAACATATCCCAAATATC 662 >seq623066 Length=2774 Score = 165 bits (182), Expect = 8e-36 Identities = 413/624 (66%), Gaps = 54/624 (9%) Strand=Plus/Minus Query 14186 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 14245 |||| |||||| || ||||| ||||||||||||||||| || |||||||| ||||| | | Sbjct 1606 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAAT 1547 Query 14246 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 14305 ||||| ||||| ||||| ||||||||||| ||||||||||||||||| ||| || Sbjct 1546 TCGTTGCTAAATGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAACATTAATGCA 1487 Query 14306 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14365 || ||| ||| ||||| || ||||| | || || || | || ||| || || Sbjct 1486 AAACTTCCACTAAAAAATATCCCTTCAACAACTGCGAAAGCAACTACTCGAGTTCTGAAA 1427 Query 14366 GATGCTTTTTTGTTCGATATCCATTTTCTAGC-CCATTCAGAtttttttttAATAAAATC 14424 || | || | |||||| | ||| ||| | | ||| |||| | | | Sbjct 1426 TTTGAGTACTTATCATTTATCCAACGTAAAGCTCCACTGGGCTTTCTTTTGAGCACATGG 1367 Query 14425 CATTGTTTCAATAGCATTAAAT--------------AAATGTT----------------- 14453 |||||||||||||||||||||| |||| || Sbjct 1366 CATTGTTTCAATAGCATTAAATAAGTTATCCCCTTAAAATATTTTATCACAAAATCATTT 1307 Query 14454 -------CCTT--CT---CTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 14501 |||| || ||||| || || || |||| || || | |||| |||| Sbjct 1306 ATTTAAGCCTTTACTTGACTTTACTATCTGTGATATATGAGTCGATTAATAAGGAGTACA 1247 Query 14502 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAA-ACATCTAGCTTCTGAC 14560 |||| ||||| |||||||| |||| || ||||||| |||||| || || ||||| | Sbjct 1246 TTTCTGAGTGAATGTTTTCATTAGCAATTTGAAAACTATAAAATACTTC-GGCTTCAGGA 1188 Query 14561 CATTGTACCTC-TGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14619 | || || ||| | ||| | ||| | |||||| || ||||| |||||||||| Sbjct 1187 ATCTAAACTTCTTGAAT-AAACCATTCCAGGAGATTTTCGTTTACTATTCCATCACTAGA 1129 Query 14620 TGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTG--AGTTTTTTC 14677 ||||||||| || | | | |||||| || | || | || ||| | |||||| Sbjct 1128 TGCAAAAAACGCAAGAACATGCGAAATAAATTAACGTTCAT--TTTCTGTAAACTTTTTC 1071 Query 14678 CAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAAC-AGC 14736 |||| || ||||| || || | ||| ||| ||| || |||| ||||| | | | ||| Sbjct 1070 CAATGAGCAAAATCTTTTGATAAATCGACTCCATTTACCGTCC-AAAACGATGATCTAGC 1012 Query 14737 TTTTTTATACATTACCCATATTTC 14760 || ||| ||||| |||| || || Sbjct 1011 CTTGTTAAACATTTCCCAAATATC 988 >seq105517 Length=321 Score = 154 bits (170), Expect = 1e-32 Identities = 192/263 (73%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 14186 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 14245 |||| |||||| || ||||| ||||||||||||||||| || |||||||||||||| | | Sbjct 318 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAAT 259 Query 14246 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 14305 ||||| ||| | ||||| ||||||||||| ||||||||||||||||| ||| || Sbjct 258 TCGTTGCTAAAAGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAAAATTAATGCA 199 Query 14306 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14365 || ||| ||| ||||| || ||||| || || || || | || ||| ||| || Sbjct 198 AAACTTCCACTAAAAAATATCCCTTCAACAGCTGCGAAAGCAACTACTCGAGTTCCGAAA 139 Query 14366 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14425 | | || | |||||| | |||||| | ||||| |||| | | | | Sbjct 138 TTGGAGTACTTATCATTTATCCAACGTAAAGCCCACTGGGATTTCTTTTGAGCACATGGC 79 Query 14426 ATTGTTTCAATAGCATTAAATAA 14448 ||| ||||||||||||||||||| Sbjct 78 ATTATTTCAATAGCATTAAATAA 56 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478435019223920