Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq279238 91.5 1e-13 seq375912 86.0 5e-12 seq247457 86.0 5e-12 seq238832 86.0 5e-12 seq231077 84.2 2e-11 >seq279238 Length=1756 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||||||||||||||| ||||| || ||||| ||||| | || |||||||| Sbjct 1181 ATGCAGATATTTGTTAAAACATTAACAGGAAAAACTATAACATTAGAAGTCGAATCATCT 1240 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | |||| |||||| |||||| | || ||||| | || || ||| Sbjct 1241 GATTCTATCGAAAATGTTAAATCTAAAATTCAAGATAAGGAAGGTATTCCTCCAGATCAG 1300 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||| | || |||| ||| || || ||| |||||||| | ||| || ||||| | | Sbjct 1301 CAAAGATTGATATTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGATTATAAC 1360 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATT 25049 || || || || | || | ||||| || ||||| || Sbjct 1361 ATTCAAAAGGAATCAACTTTGCATTTGGTCTTACGTTT 1398 >seq375912 Length=2531 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||||||||| | || || ||||| || || | || || ||||| || Sbjct 1534 ATGCAGATTTTTGTTAAAACTCTCACTGGTAAAACAATTACATTAGAAGTGGAATCAAGT 1475 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | |||||| ||| || | ||| || | |||||||| | || ||||| Sbjct 1474 GATACAATAGAAAATGTAAAAGCAAAGATCCAAGATAAAGAAGGAATTCCTCCAGACCAA 1415 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||||| | |||| ||| || |||||| | |||||| || || ||||||| Sbjct 1414 CAACGACTTATATTTGCCGGGAAACAATTAGAAGATGGACGAACATTGTCTGATTACAAT 1355 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGTCAAT 25063 || || ||||| | || | |||||||| ||||| | || || ||| ||| Sbjct 1354 ATTCAAAAAGAATCAACTTTACATTTAGTTTTACGTCTTCGAGGCGGTTAAT 1303 >seq247457 Length=2460 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||||||||| | || || ||||| || || | || || ||||| || Sbjct 1367 ATGCAGATTTTTGTTAAAACTCTCACTGGTAAAACAATTACATTAGAAGTGGAATCAAGT 1426 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | |||||| ||| || | ||| || | |||||||| | || ||||| Sbjct 1427 GATACAATAGAAAATGTAAAAGCAAAGATCCAAGATAAAGAAGGAATTCCTCCAGACCAA 1486 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||||| | |||| ||| || |||||| | |||||| || || ||||||| Sbjct 1487 CAACGACTTATATTTGCCGGGAAACAATTAGAAGATGGACGAACATTGTCTGATTACAAT 1546 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGTCAAT 25063 || || ||||| | || | |||||||| ||||| | || || ||| ||| Sbjct 1547 ATTCAAAAAGAATCAACTTTACATTTAGTTTTACGTCTTCGAGGCGGTTAAT 1598 >seq238832 Length=2299 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||||||||| | || || ||||| || || | || || ||||| || Sbjct 1206 ATGCAGATTTTTGTTAAAACTCTCACTGGTAAAACAATTACATTAGAAGTGGAATCAAGT 1265 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | |||||| ||| || | ||| || | |||||||| | || ||||| Sbjct 1266 GATACAATAGAAAATGTAAAAGCAAAGATCCAAGATAAAGAAGGAATTCCTCCAGACCAA 1325 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||||| | |||| ||| || |||||| | |||||| || || ||||||| Sbjct 1326 CAACGACTTATATTTGCCGGGAAACAATTAGAAGATGGACGAACATTGTCTGATTACAAT 1385 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGTCAAT 25063 || || ||||| | || | |||||||| ||||| | || || ||| ||| Sbjct 1386 ATTCAAAAAGAATCAACTTTACATTTAGTTTTACGTCTTCGAGGCGGTTAAT 1437 >seq231077 Length=1080 Score = 84.2 bits (92), Expect = 2e-11 Identities = 155/223 (70%), Gaps = 6/223 (3%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||| | || ||||| ||||| ||||| ||||| || || || | || || ||| | || Sbjct 371 ATGGAAATTTTTGTGAAAACATTAACTGGCAAGACTATCACTTTAGAAGTTGAAGCAAGT 430 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | | |||| ||| || | |||||| | | |||||||| | || ||| || Sbjct 431 GATACTATTGAAAATGTAAAAGCAAAAATCGAAGATAAAGAAGGAATTCCTTCTGATCAA 490 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGAT--TCCATGACTATGAAC-GATTAC 25008 ||||| | || | || || |||||| |||||||| || | || || | | ||||| Sbjct 491 CAACGACTTATTTTCGCTGGGAAACAATTGGAAGATGGTCGA--AC-ATTACCTGATTAT 547 Query 25009 AGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGC 25051 | || || ||||| | || | ||||| ||||||||||||| Sbjct 548 AATATTCAAAAAGAATCAACTTTACATTTGGTGTTACGATTGC 590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414997415900480