Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq375912 111 2e-19 seq247457 111 2e-19 seq238832 111 2e-19 seq627119 93.3 4e-14 seq279238 89.7 5e-13 seq504844 86.0 6e-12 seq231077 86.0 6e-12 seq22558 82.4 8e-11 >seq375912 Length=2531 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || ||||| || |||||||| || | || || || ||||| || || ||||| | Sbjct 1536 CCACCACGTAATCGTAAAACTAAATGTAAAGTTGATTCCTTTTGGATATTGTAATCAGAC 1595 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||| | || | ||||| | ||||| |||||| | || || ||||| ||||| ||||| Sbjct 1596 AATGTTCGTCCA-TCTTCTAATTGTTTCCCAGCAAAAATAAGTCGTTGTTGATCTGGAGG 1654 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| ||| ||||| | ||| | ||||||| | | || || Sbjct 1655 AATTCCTTCCTTATCTTGGATCTTTGCTTTTACATTTTCAATTGTGTCGCTTGATTCGAC 1714 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| || | ||||| || || | ||||| || ||||||||||| Sbjct 1715 TTCAAGAGTTATAGTCTTACCAGTAAGTGTTTTCACAAATATTTGCAT 1762 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 |||||||| | ||| |||||||| || | || || ||||||||||| || ||||| | Sbjct 1308 CCGCCTCGAAGACGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAC 1367 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||| | || | ||||| | ||||| || ||| | || || ||||| || || ||||| Sbjct 1368 AATGTTCGTCCA-TCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGG 1426 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || |||||||| || ||| ||| ||||| | ||| | ||| || | | ||||| Sbjct 1427 AATTCCTTCTTTATCTTGGATCTTTGCTTTTACATTTTCTATTGTATCACTTGATTCCAC 1486 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || || || || | ||||| || || || ||||| Sbjct 1487 TTCTAATGTAATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1534 >seq247457 Length=2460 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || ||||| || |||||||| || | || || || ||||| || || ||||| | Sbjct 1365 CCACCACGTAATCGTAAAACTAAATGTAAAGTTGATTCCTTTTGGATATTGTAATCAGAC 1306 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||| | || | ||||| | ||||| |||||| | || || ||||| ||||| ||||| Sbjct 1305 AATGTTCGTCCA-TCTTCTAATTGTTTCCCAGCAAAAATAAGTCGTTGTTGATCTGGAGG 1247 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| ||| ||||| | ||| | ||||||| | | || || Sbjct 1246 AATTCCTTCCTTATCTTGGATCTTTGCTTTTACATTTTCAATTGTGTCGCTTGATTCGAC 1187 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| || | ||||| || || | ||||| || ||||||||||| Sbjct 1186 TTCAAGAGTTATAGTCTTACCAGTAAGTGTTTTCACAAATATTTGCAT 1139 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 |||||||| | ||| |||||||| || | || || ||||||||||| || ||||| | Sbjct 1593 CCGCCTCGAAGACGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAC 1534 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||| | || | ||||| | ||||| || ||| | || || ||||| || || ||||| Sbjct 1533 AATGTTCGTCCA-TCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGG 1475 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || |||||||| || ||| ||| ||||| | ||| | ||| || | | ||||| Sbjct 1474 AATTCCTTCTTTATCTTGGATCTTTGCTTTTACATTTTCTATTGTATCACTTGATTCCAC 1415 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || || || || | ||||| || || || ||||| Sbjct 1414 TTCTAATGTAATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1367 >seq238832 Length=2299 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || ||||| || |||||||| || | || || || ||||| || || ||||| | Sbjct 1204 CCACCACGTAATCGTAAAACTAAATGTAAAGTTGATTCCTTTTGGATATTGTAATCAGAC 1145 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||| | || | ||||| | ||||| |||||| | || || ||||| ||||| ||||| Sbjct 1144 AATGTTCGTCCA-TCTTCTAATTGTTTCCCAGCAAAAATAAGTCGTTGTTGATCTGGAGG 1086 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| ||| ||||| | ||| | ||||||| | | || || Sbjct 1085 AATTCCTTCCTTATCTTGGATCTTTGCTTTTACATTTTCAATTGTGTCGCTTGATTCGAC 1026 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| || | ||||| || || | ||||| || ||||||||||| Sbjct 1025 TTCAAGAGTTATAGTCTTACCAGTAAGTGTTTTCACAAATATTTGCAT 978 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 |||||||| | ||| |||||||| || | || || ||||||||||| || ||||| | Sbjct 1432 CCGCCTCGAAGACGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAC 1373 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||| | || | ||||| | ||||| || ||| | || || ||||| || || ||||| Sbjct 1372 AATGTTCGTCCA-TCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGG 1314 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || |||||||| || ||| ||| ||||| | ||| | ||| || | | ||||| Sbjct 1313 AATTCCTTCTTTATCTTGGATCTTTGCTTTTACATTTTCTATTGTATCACTTGATTCCAC 1254 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || || || || | ||||| || || || ||||| Sbjct 1253 TTCTAATGTAATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1206 >seq627119 Length=2126 Score = 93.3 bits (102), Expect = 4e-14 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | |||||||||||| || | || || ||||||||||| || ||||| | Sbjct 1207 CCACCCCGGAGACGCAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAC 1148 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| || ||||| | |||||| |||||| | || || ||||| ||||| || || Sbjct 1147 AATGTTCTGCCATCTTCTAACTGTTTTCCAGCAAATATAAGTCGTTGTTGATCTGGTGGA 1088 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| || || ||| || ||||| | ||| | ||| || | | || || Sbjct 1087 ATTCCTTCCTTATCTTGGATCTTCGCTTTTACATTTTCTATTGTATCACTTGATTCAACT 1028 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTG 139761 |||| || | || || || || | ||||| || ||||| || Sbjct 1027 TCAAGAGTGATAGTTTTCCCAGTAAGTGTTTTCACAAATATCTG 984 >seq279238 Length=1756 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| |||||| || || || || | || || || ||||||||||||||||| | Sbjct 1407 CCACCTCTTAAACGTAAGACCAAATGCAAAGTTGATTCCTTTTGAATGTTATAATCAGAC 1348 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | || ||||||||| | |||| | ||||||||| ||||| Sbjct 1347 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAATATCAATCTTTGCTGATCTGGAGGA 1288 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| |||| | |||| | | ||| | | || | | || || Sbjct 1287 ATACCTTCCTTATC-TTGAATTTTAGATTTAACATTTTCGATAGAATCAGATGATTCGAC 1229 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || || || || || ||||| || ||||| ||||| Sbjct 1228 TTCTAATGTTATAGTTTTTCCTGTTAATGTTTTAACAAATATCTGCAT 1181 >seq504844 Length=3026 Score = 86.0 bits (94), Expect = 6e-12 Identities = 163/240 (68%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||||||| || |||||||| || | || || ||||||||||| || ||||| Sbjct 1531 CCTCCTCGTAATCGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAT 1590 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| | ||||| | ||||| |||||| | || || ||||| ||||| || || Sbjct 1591 AATGTTCGGCCATCTTCCAATTGTTTTCCAGCAAATATAAGTCGTTGTTGATCTGGTGGA 1650 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||||| || | ||| ||| | | ||| | ||| || | | || || Sbjct 1651 ATTCCTTCTTCATCTTGTACCTTTGCTTTGACGTTTTCTATTGTATCACTTGATTCAACT 1710 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCTTATGTTTTA 139777 |||| || | || || || || | ||||| || || |||||||| ||||||| || Sbjct 1711 TCAATAGTGATAGTTTTCCCAGTAAGTGTTTTAACAAAAATTTGCATTCTTTATGTTATA 1770 >seq231077 Length=1080 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/220 (69%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606 || || || || || || | || || ||||||||||| |||||||| | ||| || Sbjct 588 AATCGTAACACCAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGGTAATGT--TC 531 Query 139607 GA--GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTT 139664 || ||||| | ||||| ||||| | || || ||||| ||||| | ||| || |||| Sbjct 530 GACCATCTTCCAATTGTTTCCCAGCGAAAATAAGTCGTTGTTGATCAGAAGGAATTCCTT 471 Query 139665 CTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGG 139724 |||| || ||||||| ||||| | ||| | || || | | || || || | | Sbjct 470 CTTTATCTTCGATTTTTGCTTTTACATTTTCAATAGTATCACTTGCTTCAACTTCTAAAG 411 Query 139725 TCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | | |||||||| || || ||||| || || |||| ||| Sbjct 410 TGATAGTCTTGCCAGTTAATGTTTTCACAAAAATTTCCAT 371 >seq22558 Length=224 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/152 (73%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || ||||| || ||||| || || | || || || ||||| || || ||||| | Sbjct 152 CCACCACGTAATCGTAAAACCAAATGTAAAGTTGATTCCTTTTGGATATTGTAATCAGAC 93 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||| | || | ||||| | ||||| ||||| | || || ||||||||||| ||||| Sbjct 92 AATGTTCGTCCA-TCTTCTAATTGTTTCCCAGCGAAAATAAGTCGTTGCTGATCAGGAGG 34 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTA 139688 || |||||||| || ||||||| ||||| Sbjct 33 AATTCCTTCTTTATCTTGGATTTTTGCTTTTA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492042198324800