Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq629926 212 6e-50 seq610803 197 1e-45 seq623066 156 4e-33 seq105517 154 1e-32 >seq629926 Length=3335 Score = 212 bits (234), Expect = 6e-50 Identities = 429/637 (67%), Gaps = 60/637 (9%) Strand=Plus/Minus Query 13854 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13913 |||| |||||| || ||||| ||||||||||||||||| || |||||||| ||||| | | Sbjct 2690 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATCAAT 2631 Query 13914 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCA 13973 ||||| ||| | |||||| ||||||||||| |||||||| ||||||||||||| ||| Sbjct 2630 TCGTTACTAAAAGATAATCCCGGCATCAATCCACGTTTTTTCAACCAAAATATTGACGCA 2571 Query 13974 AA--TGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAA 14031 || | | | |||| ||||| || ||||| |||||||| || | | ||| ||||| Sbjct 2570 AAACTTCCACTGAAA--AATATCCCTTCAACAGCAGCAAAAGCAACAATTCGAATTCCAA 2513 Query 14032 ACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAAT 14091 | || | ||| | ||||| | | ||||||| | |||||| | || | | Sbjct 2512 AATTTGACTGTTTATCATTAATCCAATGTAACGCCCATTGGGCTTTTTTATGAACACATG 2453 Query 14092 CCATTGTTTCAATAGCATTAAATAA-ATATTCC--------TTCT--------------- 14127 ||||||||||||||||||||| || | |||| |||| Sbjct 2452 GCATTGTTTCAATAGCATTAAACAAGTTGTTCCTGTTGAAATTCTTATATCATAGCAAGA 2393 Query 14128 -------------CTTTAGTACTT-------------GAAATGTATGTATCAATAAGTAA 14161 |||| ||||| | |||||| | |||||| | || Sbjct 2392 TACGAATGATTAACTTTCATACTTAGTTTCATTATCGGTAATGTAGGAATCAATTAATAC 2333 Query 14162 GCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAA-GCATCTAG 14220 ||||||||| || || || || || ||||| || ||||||| ||||| || || || Sbjct 2332 AGAATACATTTCCGAATGAATATTCTCAATAGCAATTTGAAAACTGTAAAATGCTTC-AG 2274 Query 14221 CTTCCGACCATTGTACTTCCGAGTA-AAATCTTTCGGCCAAATTTTCATTAACTATACCA 14279 |||| | ||| || || | | | ||||||| | | | ||||||||| ||||| ||| Sbjct 2273 CTTCAG-GAATTTTAATTTCTTGGATAAATCTTCCTACAAGATTTTCATTCACTATTCCA 2215 Query 14280 TCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC-TTCATTGTTGAG 14338 ||||||||||||||||| | | | || | |||||| ||| | || || ||| || Sbjct 2214 TCACTAGCTGCAAAAAACGAGAGAACGTGTGAAATAAAATATCGTTCATTTTCTGTCAAG 2155 Query 14339 TTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14398 || |||||||| | ||||| || || | ||| ||||||| || | |||||| || Sbjct 2154 -TTATTCCAATCAGCAAAATCTTTGGATAAATCAACTTCATTTACAGACCAAAATGAAGA 2096 Query 14399 GACAGCTTTTTTATACATTACCCATATTTCTTTATAT 14435 ||| || ||| |||| |||| || || ||| || Sbjct 2095 TCTAGCCTTATTAAACATATCCCAAATGTCATTAAAT 2059 >seq610803 Length=1907 Score = 197 bits (218), Expect = 1e-45 Identities = 396/588 (67%), Gaps = 52/588 (9%) Strand=Plus/Minus Query 13854 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13913 |||| |||||| || ||||| ||||||||||||||||| || |||||||| ||||| | | Sbjct 1282 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAAT 1223 Query 13914 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCA 13973 ||||| ||| | ||||| ||||||||||| |||||||||||||||||||||| ||| Sbjct 1222 TCGTTGCTAAACGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAATATTGATGCA 1163 Query 13974 AATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14033 || || ||| ||||| || ||||| || || || || | || ||| ||| || Sbjct 1162 AAACTTCCACTAAAAAATATCCCTTCAACGGCTGCGAAAGCAACTACTCGAGTTCCGAAA 1103 Query 14034 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14093 || | || | |||||| | |||||||| | ||| |||| || | | | Sbjct 1102 TTTGAGTGCTTATCATTTATCCAACGTAAAGCCCATTGGGCTTTCTTTTGAACACATGGC 1043 Query 14094 ATTGTTTCAATAGCATTAAAT--------------AAATATT---------------CCT 14124 ||||||||||||||||||||| ||||||| | | Sbjct 1042 ATTGTTTCAATAGCATTAAATAAGTTATCCCTGTAAAATATTTTATCACAAACAAAACAT 983 Query 14125 TCTCTTTAG----TACTT-------------GAAATGTATGTATCAATAAGTAAGCTATA 14167 || || || ||||| | || |||| ||| || | |||| || Sbjct 982 TCATTTAAGCATTTACTTGGCTTTACTATCGGTGATATATGAATCGATTAATAAGGAGTA 923 Query 14168 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAA-GCATCTAGCTTCCG 14226 |||||| ||||| |||||||| || || || ||||||| |||||| || || ||||| | Sbjct 922 CATTTCTGAGTGAATGTTTTCAATGGCAATTTGAAAACTATAAAATGCTTC-GGCTTCGG 864 Query 14227 ACCATTGTACTTC-CGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14285 | ||||| || | ||| | ||| | | |||||| || ||||| ||||||||| Sbjct 863 GAATCTTAACTTCTTGAAT-AAACCGTTCCACGAGATTTTCGTTTACTATTCCATCACTA 805 Query 14286 GCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC-TTCATTGTTGAGTTTTTT 14344 ||||||||||| || | | | |||||| || | || || |||| | ||||| Sbjct 804 GCTGCAAAAAACGCAAGAACATGCGAAATAAAATAACGTTCATTTTCTGTT-AACTTTTT 746 Query 14345 CCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14392 ||||| | ||||| || || | ||| ||||||| || |||||||| Sbjct 745 CCAATGAGCAAAATCTTTTGATAAATCAACTTCATTTACCGTCCAAAA 698 >seq623066 Length=2774 Score = 156 bits (172), Expect = 4e-33 Identities = 407/623 (65%), Gaps = 52/623 (8%) Strand=Plus/Minus Query 13854 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13913 |||| |||||| || ||||| ||||||||||||||||| || |||||||| ||||| | | Sbjct 1606 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAAT 1547 Query 13914 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCA 13973 ||||| ||||| ||||| ||||||||||| ||||||||||||||||| ||| ||| Sbjct 1546 TCGTTGCTAAATGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAACATTAATGCA 1487 Query 13974 AATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14033 || || ||| ||||| || ||||| | || || || | || ||| || || Sbjct 1486 AAACTTCCACTAAAAAATATCCCTTCAACAACTGCGAAAGCAACTACTCGAGTTCTGAAA 1427 Query 14034 GATGCTTTTTTGTTCGATATCCATTTTCTAGC-CCATTCAGAtttttttttAATAAAATC 14092 || | || | |||||| | ||| ||| | | ||| |||| | | | Sbjct 1426 TTTGAGTACTTATCATTTATCCAACGTAAAGCTCCACTGGGCTTTCTTTTGAGCACATGG 1367 Query 14093 CATTGTTTCAATAGCATTAAAT--------------AAATATT----------------- 14121 |||||||||||||||||||||| ||||||| Sbjct 1366 CATTGTTTCAATAGCATTAAATAAGTTATCCCCTTAAAATATTTTATCACAAAATCATTT 1307 Query 14122 -------CCTT--CT---CTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 14169 |||| || ||||| || || || |||| || || | |||| |||| Sbjct 1306 ATTTAAGCCTTTACTTGACTTTACTATCTGTGATATATGAGTCGATTAATAAGGAGTACA 1247 Query 14170 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACC 14229 |||| ||||| |||||||| |||| || ||||||| |||||| | ||||| | Sbjct 1246 TTTCTGAGTGAATGTTTTCATTAGCAATTTGAAAACTATAAAATACTTCGGCTTCAGGAA 1187 Query 14230 ATTGTACTTC-CGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCT 14288 | ||||| || | ||| | ||| | |||||| || ||||| |||||||||| | Sbjct 1186 TCTAAACTTCTTGAAT-AAACCATTCCAGGAGATTTTCGTTTACTATTCCATCACTAGAT 1128 Query 14289 GCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGT---TGAGTTTTTTC 14345 |||||||| || | | | |||||| || | |||||| | | | |||||| Sbjct 1127 GCAAAAAACGCAAGAACATGCGAAATAAATTAACG---TTCATTTTCTGTAAACTTTTTC 1071 Query 14346 CAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCT 14405 |||| | ||||| || || | ||| ||| ||| || |||||||| | ||| Sbjct 1070 CAATGAGCAAAATCTTTTGATAAATCGACTCCATTTACCGTCCAAAACGATGATCTAGCC 1011 Query 14406 TTTTTATACATTACCCATATTTC 14428 || ||| ||||| |||| || || Sbjct 1010 TTGTTAAACATTTCCCAAATATC 988 >seq105517 Length=321 Score = 154 bits (170), Expect = 1e-32 Identities = 192/263 (73%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 13854 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13913 |||| |||||| || ||||| ||||||||||||||||| || |||||||||||||| | | Sbjct 318 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAAT 259 Query 13914 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCA 13973 ||||| ||| | ||||| ||||||||||| ||||||||||||||||| ||| ||| Sbjct 258 TCGTTGCTAAAAGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAAAATTAATGCA 199 Query 13974 AATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14033 || || ||| ||||| || ||||| || || || || | || ||| ||| || Sbjct 198 AAACTTCCACTAAAAAATATCCCTTCAACAGCTGCGAAAGCAACTACTCGAGTTCCGAAA 139 Query 14034 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14093 | | || | |||||| | |||||| | ||||| |||| | | | | Sbjct 138 TTGGAGTACTTATCATTTATCCAACGTAAAGCCCACTGGGATTTCTTTTGAGCACATGGC 79 Query 14094 ATTGTTTCAATAGCATTAAATAA 14116 ||| ||||||||||||||||||| Sbjct 78 ATTATTTCAATAGCATTAAATAA 56 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475838641219600