Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq629926 192 6e-44 seq610803 170 2e-37 seq105517 141 9e-29 seq623066 136 4e-27 >seq629926 Length=3335 Score = 192 bits (212), Expect = 6e-44 Identities = 420/634 (66%), Gaps = 54/634 (9%) Strand=Plus/Minus Query 13642 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13701 |||| |||||| || ||||| ||||||||||||||||| || |||||||| ||||| | | Sbjct 2690 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATCAAT 2631 Query 13702 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 13761 ||||| ||| | |||||| ||||||||||| |||||||| ||||||||||||| || Sbjct 2630 TCGTTACTAAAAGATAATCCCGGCATCAATCCACGTTTTTTCAACCAAAATATTGACGCA 2571 Query 13762 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAAC 13821 || ||| || ||||| || ||||| |||||||| || | | ||| |||||| Sbjct 2570 AAACTTCCACTGAAAAATATCCCTTCAACAGCAGCAAAAGCAACAATTCGAATTCCAAAA 2511 Query 13822 GATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 13881 || | ||| | ||||| | | ||||||| | |||||| | || | | | Sbjct 2510 TTTGACTGTTTATCATTAATCCAATGTAACGCCCATTGGGCTTTTTTATGAACACATGGC 2451 Query 13882 ATTGTTTCGATTGCATTGAATAA-ATGTTCC--------TTCT----------------- 13915 |||||||| || ||||| || || |||||| |||| Sbjct 2450 ATTGTTTCAATAGCATTAAACAAGTTGTTCCTGTTGAAATTCTTATATCATAGCAAGATA 2391 Query 13916 -----------CTTTAGTACTT-------------GAAATGTATGTATCAATAAGTAAGC 13951 |||| ||||| | |||||| | |||||| | || Sbjct 2390 CGAATGATTAACTTTCATACTTAGTTTCATTATCGGTAATGTAGGAATCAATTAATACAG 2331 Query 13952 TATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTT 14011 ||||||||| || || || || || ||||| || ||||||| ||||| | ||||| Sbjct 2330 AATACATTTCCGAATGAATATTCTCAATAGCAATTTGAAAACTGTAAAATGCTTCAGCTT 2271 Query 14012 CTGACCATTGTACCTCCGAGTA-AAATCTTTCTGCCAAGTTTTCATTAACAATACCATCA 14070 | | ||| || | | | | ||||||| || | | |||||||| || || |||||| Sbjct 2270 CAG-GAATTTTAATTTCTTGGATAAATCTTCCTACAAGATTTTCATTCACTATTCCATCA 2212 Query 14071 CTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC-TTCATTGTTGAGTTT 14129 |||||||||||||| | | | || | |||||| ||| | || || ||| || || Sbjct 2211 CTAGCTGCAAAAAACGAGAGAACGTGTGAAATAAAATATCGTTCATTTTCTGTCAAG-TT 2153 Query 14130 TTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGAC 14189 |||||||| || ||||| || || | ||| ||||||| || | |||||| || Sbjct 2152 ATTCCAATCAGCAAAATCTTTGGATAAATCAACTTCATTTACAGACCAAAATGAAGATCT 2093 Query 14190 AGCTTTTTTATACATTACCCATATTTCTTTATAT 14223 ||| || ||| |||| |||| || || ||| || Sbjct 2092 AGCCTTATTAAACATATCCCAAATGTCATTAAAT 2059 >seq610803 Length=1907 Score = 170 bits (188), Expect = 2e-37 Identities = 388/587 (66%), Gaps = 50/587 (9%) Strand=Plus/Minus Query 13642 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13701 |||| |||||| || ||||| ||||||||||||||||| || |||||||| ||||| | | Sbjct 1282 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAAT 1223 Query 13702 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 13761 ||||| ||| | ||||| ||||||||||| |||||||||||||||||||||| || Sbjct 1222 TCGTTGCTAAACGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAATATTGATGCA 1163 Query 13762 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAAC 13821 || ||| ||| ||||| || ||||| || || || || | || ||| ||| || Sbjct 1162 AAACTTCCACTAAAAAATATCCCTTCAACGGCTGCGAAAGCAACTACTCGAGTTCCGAAA 1103 Query 13822 GATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 13881 || | || | |||||| | |||||||| | ||| |||| || | | | Sbjct 1102 TTTGAGTGCTTATCATTTATCCAACGTAAAGCCCATTGGGCTTTCTTTTGAACACATGGC 1043 Query 13882 ATTGTTTCGATTGCATTGAATAAATGTTCC------------TTCTC------------- 13916 |||||||| || ||||| ||||| | ||| || || Sbjct 1042 ATTGTTTCAATAGCATTAAATAAGTTATCCCTGTAAAATATTTTATCACAAACAAAACAT 983 Query 13917 ---TTTA-----GTACTT-------------GAAATGTATGTATCAATAAGTAAGCTATA 13955 |||| ||||| | || |||| ||| || | |||| || Sbjct 982 TCATTTAAGCATTTACTTGGCTTTACTATCGGTGATATATGAATCGATTAATAAGGAGTA 923 Query 13956 CATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGA 14015 |||||| ||||| |||||||| || || || ||||||| |||||| | ||||| | Sbjct 922 CATTTCTGAGTGAATGTTTTCAATGGCAATTTGAAAACTATAAAATGCTTCGGCTTC-GG 864 Query 14016 CCATTGTACCTCCGAGTA-AAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAG 14074 || || || | | | ||| | ||| | | ||||| || || || |||||||||| Sbjct 863 GAATCTTAACTTCTTGAATAAACCGTTCCACGAGATTTTCGTTTACTATTCCATCACTAG 804 Query 14075 CTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC-TTCATTGTTGAGTTTTTTC 14133 |||||||||| || | | | |||||| || | || || |||| | |||||| Sbjct 803 CTGCAAAAAACGCAAGAACATGCGAAATAAAATAACGTTCATTTTCTGTT-AACTTTTTC 745 Query 14134 CAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14180 |||| || ||||| || || | ||| ||||||| || |||||||| Sbjct 744 CAATGAGCAAAATCTTTTGATAAATCAACTTCATTTACCGTCCAAAA 698 >seq105517 Length=321 Score = 141 bits (156), Expect = 9e-29 Identities = 189/263 (72%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 13642 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13701 |||| |||||| || ||||| ||||||||||||||||| || |||||||||||||| | | Sbjct 318 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAAT 259 Query 13702 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 13761 ||||| ||| | ||||| ||||||||||| ||||||||||||||||| ||| || Sbjct 258 TCGTTGCTAAAAGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAAAATTAATGCA 199 Query 13762 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAAC 13821 || ||| ||| ||||| || ||||| || || || || | || ||| ||| || Sbjct 198 AAACTTCCACTAAAAAATATCCCTTCAACAGCTGCGAAAGCAACTACTCGAGTTCCGAAA 139 Query 13822 GATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 13881 | | || | |||||| | |||||| | ||||| |||| | | | | Sbjct 138 TTGGAGTACTTATCATTTATCCAACGTAAAGCCCACTGGGATTTCTTTTGAGCACATGGC 79 Query 13882 ATTGTTTCGATTGCATTGAATAA 13904 ||| |||| || ||||| ||||| Sbjct 78 ATTATTTCAATAGCATTAAATAA 56 >seq623066 Length=2774 Score = 136 bits (150), Expect = 4e-27 Identities = 132/170 (78%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 13642 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13701 |||| |||||| || ||||| ||||||||||||||||| || |||||||| ||||| | | Sbjct 1606 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAAT 1547 Query 13702 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 13761 ||||| ||||| ||||| ||||||||||| ||||||||||||||||| ||| || Sbjct 1546 TCGTTGCTAAATGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAACATTAATGCA 1487 Query 13762 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCG 13811 || ||| ||| ||||| || ||||| | || || || | || ||| Sbjct 1486 AAACTTCCACTAAAAAATATCCCTTCAACAACTGCGAAAGCAACTACTCG 1437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474708677198160